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BaseInfo

ncRNA ID novel_ath_miR14
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:11208692-11208877 [+]
Reference genome TAIR10
Source SRR1560119
Length 23
Mature sequence(if miRNA) 1 - CGAAACCAAAGUUGUCGAAACUA - 23
Stem-loop(if miRNA) --  A  C   -    G    -    A   A  C    AAA   GU C  --GC  G      --G    AAU    CGUC     A  C   -    G
  CG AA CAA AGUU UCGA AACU UUG UU CGUC   ACG  G GA    GC GAGCUC   GCUU   CUGU    CGACG AA CAA AGUU U
  || || ||| |||| |||| |||| ||| || ||||   |||  | ||    || ||||||   ||||   ||||    ||||| || ||| |||| C
  GC UU GUU UCAA AGCU UUGA AAC AA GCAG   UGC  U CU    CG CUCGAG   CGAG   GGCG    GCUGC UU GUU UCAA G
CU  C  A   A    -    G    -   C  A    -CC   UG -  AAUU  G      GGG    CGU    --AA     C  A   A    A
Stem-loop sequence CGAAACCAAAGUUGUCGAAACUAUUGAUUCCGUCAAAACGGUGCGAGCGCGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUCCGUCGAAGCGGUGCGAGCGGGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUCCGUC