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BaseInfo

ncRNA ID novel_ahy_miR1189
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:52450986-52451082 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 74 - AAACUUAGAGUUUGACUGUGUGGG - 97
Stem-loop(if miRNA) -CA    ---       A       AAUG      UU  AC       U
   ACAC   UAAACUU GAGUUUG    UGGGGG  CA  ACCAAAC U
   ||||   ||||||| |||||||    ||||||  ||  ||||||| A
   UGUG   GUUUGAG UUCAAAC    ACCCUC  GU  UGGUUUG G
GGG    UCA       A       CACA      CG  GU       A
Stem-loop sequence CAACACUAAACUUAGAGUUUGAAUGUGGGGGUUCAACACCAAACUUAGAGUUUGGUUGUGGCCUCCCAACACCAAACUUAGAGUUUGACUGUGUGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ753146.1
ncRNA:24   GGGUGUGUCAGUUUGAGAUUCAAA   1
  |||*||||||||||||||||||||
targets:321   CCCCCACAGUCAAACUCUAAGUUU   344

0.0 TSA: Arachis hypogaea CL7142Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ754478.1
ncRNA:24   GGGUGUGUCAGUUUGAGAUUCAAA   1
  |==|=|||*|||||*|||||||||
targets:68   CUUAUACAUUCAAAGUCUAAGUUU   91

2.5 TSA: Arachis hypogaea CL15636Contig1.Arhy mRNA sequence NA coding protein psRNATarget
EZ753146.1
ncRNA:24   GGGUGUGUCAGUUUGAGAUUCAAA   1
  |=|*||=|**||||||||||||||
targets:387   CUCUCAUAUCCAAACUCUAAGUUU   410

3.0 TSA: Arachis hypogaea CL7142Contig1.Arhy mRNA sequence NA coding protein psRNATarget