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BaseInfo

ncRNA ID novel_ahy_miR1183
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:24221965-24222186 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AUCAGCAGCAAAGAACACAACCCA - 24
Stem-loop(if miRNA) --                 CA                   AC   UUUUUUUUAUUCUCAUCUCUUUUAAAAUUUAUAAAUAAUAAAAUAAUUUAUUUUUAGCCAAAAGUUU
  AUCAGCAGCAAAGAACA  ACCCAUUUUUCAAACUCUC  UAA                                                                   A
  |||||||||||||||||  |||||||||||||||||||  |||
  UAGUCGUCGUUUCUUGU  UGGGUAAAAGGUUUGAGAG  UAG                                                                   C
UU                 --                   GU   AGGAAACAUACCAACUAUAUUUAUUUUCUCUUACUUCAUUAAAAAUUUCUCUUUUUAUAUACUAAAU
Stem-loop sequence AUCAGCAGCAAAGAACACAACCCAUUUUUCAAACUCUCACUAAUUUUUUUUAUUCUCAUCUCUUUUAAAAUUUAUAAAUAAUAAAAUAAUUUAUUUUUAGCCAAAAGUUUACUAAAUCAUAUAUUUUUCUCUUUAAAAAUUACUUCAUUCUCUUUUAUUUAUAUCAACCAUACAAAGGAGAUUGGAGAGUUUGGAAAAUGGGUUGUUCUUUGCUGCUGAUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ747785.1
ncRNA:24   ACCCAACACAAGAAACGACGACUA   1
  |*|*||*|||||||||||||||*|
targets:633   UAGAUUAUGUUCUUUGCUGCUGCU   656

2.5 TSA: Arachis hypogaea CL586Contig2.Arhy mRNA sequence NA coding protein psRNATarget
EZ758113.1
ncRNA:24   ACCCAACACAAGAAACGACGACUA   1
  *****|*||||=||||||||||||
targets:363   ACCCAUAUGUUUUUUGCUGCUGAU   386

2.5 TSA: Arachis hypogaea CL14779Contig1.Arhy mRNA sequence NA coding protein psRNATarget