ncRNA ID | novel_ahy_miR1183 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B10:24221965-24222186 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCAGCAGCAAAGAACACAACCCA - 24 |
Stem-loop(if miRNA) |
--                 CA                   AC   UUUUUUUUAUUCUCAUCUCUUUUAAAAUUUAUAAAUAAUAAAAUAAUUUAUUUUUAGCCAAAAGUUU   AUCAGCAGCAAAGAACA  ACCCAUUUUUCAAACUCUC  UAA                                                                   A   |||||||||||||||||  |||||||||||||||||||  |||   UAGUCGUCGUUUCUUGU  UGGGUAAAAGGUUUGAGAG  UAG                                                                   C UU                 --                   GU   AGGAAACAUACCAACUAUAUUUAUUUUCUCUUACUUCAUUAAAAAUUUCUCUUUUUAUAUACUAAAU |
Stem-loop sequence | AUCAGCAGCAAAGAACACAACCCAUUUUUCAAACUCUCACUAAUUUUUUUUAUUCUCAUCUCUUUUAAAAUUUAUAAAUAAUAAAAUAAUUUAUUUUUAGCCAAAAGUUUACUAAAUCAUAUAUUUUUCUCUUUAAAAAUUACUUCAUUCUCUUUUAUUUAUAUCAACCAUACAAAGGAGAUUGGAGAGUUUGGAAAAUGGGUUGUUCUUUGCUGCUGAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ747785.1 |
|
2.5 | TSA: Arachis hypogaea CL586Contig2.Arhy mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ758113.1 |
|
2.5 | TSA: Arachis hypogaea CL14779Contig1.Arhy mRNA sequence | NA | coding protein | psRNATarget |