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BaseInfo

ncRNA ID novel_ahy_miR1181
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:1946420-1946628 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAAAGAUGAAAAUACUGACAUAUG - 24
Stem-loop(if miRNA) --                  C       A                            CU  U       U     -                -CUACG   CACUC
  AAAAGAUGAAAAUACUGA AUAUGUA CUACACUAGAUCGAAACUAAACUUGUAC  AC CAAGAUG CUUUC GUGUGACAAAAGUACU      UGG     U
  |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  || ||||||| ||||| ||||||||||||||||      |||
  UUUUCUACUUUUAUGACU UAUACAU GAUGUGAUUUAGCUUUGAUUUGAACAUG  UG GUUCUAC GAGAG CACACUGUUUUCAUGG      ACC     A
UA                  A       A                            AU  C       -     A                ACAGAA   UCCCA
Stem-loop sequence AAAAGAUGAAAAUACUGACAUAUGUAACUACACUAGAUCGAAACUAAACUUGUACCUACUCAAGAUGUCUUUCGUGUGACAAAAGUACUCUACGUGGCACUCUAACCCUCCAAAGACAGGUACUUUUGUCACACAGAGAGCAUCUUGCGUUAGUACAAGUUUAGUUUCGAUUUAGUGUAGAUACAUAUAUCAGUAUUUUCAUCUUUUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01020095.1
ncRNA:24   GUAUACAGUCAUAAAAGUAGAAAA   1
  |||||*|||||=||||||||||||
targets:158   CAUAUAUCAGUGUUUUCAUCUUUU   181

2.5 TSA: Arachis hypogaea Unigene20104 mRNA sequence NA coding protein psRNATarget