ncRNA ID | novel_ahy_miR1181 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B10:1946420-1946628 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAGAUGAAAAUACUGACAUAUG - 24 |
Stem-loop(if miRNA) |
--                  C       A                            CU  U       U     -                -CUACG   CACUC   AAAAGAUGAAAAUACUGA AUAUGUA CUACACUAGAUCGAAACUAAACUUGUAC  AC CAAGAUG CUUUC GUGUGACAAAAGUACU      UGG     U   |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||  || ||||||| ||||| ||||||||||||||||      |||   UUUUCUACUUUUAUGACU UAUACAU GAUGUGAUUUAGCUUUGAUUUGAACAUG  UG GUUCUAC GAGAG CACACUGUUUUCAUGG      ACC     A UA                  A       A                            AU  C       -     A                ACAGAA   UCCCA |
Stem-loop sequence | AAAAGAUGAAAAUACUGACAUAUGUAACUACACUAGAUCGAAACUAAACUUGUACCUACUCAAGAUGUCUUUCGUGUGACAAAAGUACUCUACGUGGCACUCUAACCCUCCAAAGACAGGUACUUUUGUCACACAGAGAGCAUCUUGCGUUAGUACAAGUUUAGUUUCGAUUUAGUGUAGAUACAUAUAUCAGUAUUUUCAUCUUUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01020095.1 |
|
2.5 | TSA: Arachis hypogaea Unigene20104 mRNA sequence | NA | coding protein | psRNATarget |