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BaseInfo

ncRNA ID novel_ahy_miR1180
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:997379-997459 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - ACUGAAAUUUUAGAGACAAAGACA - 24
Stem-loop(if miRNA) --   C A         A       CUUAUGU  C   A U
  UCU U UCUCUAAAA UUUUAGU       GU CCU C U
  ||| | ||||||||| |||||||       || ||| | U
  AGA A AGAGAUUUU AAAGUCA       CA GGA G U
AC   A C         -       -UAAAGU  U   A U
Stem-loop sequence UCUCUAUCUCUAAAAAUUUUAGUCUUAUGUGUCCCUACUUUUUGAAGGUACUGAAAUACUGAAAUUUUAGAGACAAAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ728221.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  |||||*||||||||||||||||||
targets:232   UGUCUCUGUCUCUAAAAUUUCAGU   255

1.0 TSA: Arachis hypogaea CL1Contig7237.Arhy mRNA sequence NA coding protein psRNATarget
GAER01022094.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  *||||*||||||||||||||||||
targets:347   AGUCUAUGUCUCUAAAAUUUCAGU   370

1.0 TSA: Arachis hypogaea Unigene22105 mRNA sequence NA coding protein psRNATarget
JR573198.1
ncRNA:24   ACAGAAACAGAGAUUUUAAAGUCA   1
  *||||*||||||||||||||||||
targets:164   AGUCUAUGUCUCUAAAAUUUCAGU   187

1.0 TSA: Arachis hypogaea Ahy.Unigene35840 mRNA sequence NA coding protein psRNATarget