ncRNA ID | novel_ahy_miR1178 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B02:108097641-108097776 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAACUCAGAUGCAGUCGACUUCA - 24 |
Stem-loop(if miRNA) |
--AA       A                                   C     A    UUU     AU     AACUCAG UGCAGUCGACUUCACGUGAAGUUGAUAGUUGAGAG CGUUA AUGG   GAUUG  U     ||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||   |||||  U     UUGAGUC ACGUCAGCUGAAGUGCACUUCAACUAUCAACUCUC GCAAU UACU   UUAAU  G AACA       C                                   A     C    -UU     CA |
Stem-loop sequence | AAAACUCAGAUGCAGUCGACUUCACGUGAAGUUGAUAGUUGAGAGCCGUUAAAUGGUUUGAUUGAUUUGACUAAUUUUUCAUCUAACGACUCUCAACUAUCAACUUCACGUGAAGUCGACUGCACCUGAGUUACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR584453.1 |
|
1.0 | TSA: Arachis hypogaea Ahy.Unigene50333 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR560456.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene20432 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR574947.1 |
|
1.5 | TSA: Arachis hypogaea Ahy.Unigene37984 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JR559052.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence | NA | coding protein | psRNATarget |