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BaseInfo

ncRNA ID	ath-miRf10434-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GGCCCAUCAGGCCUAGCUGU - NA
Stem-loop(if miRNA)	C  U   U      -GA       U U   C GU GU GCA CUGGGU   AUGGGCC G CAU G || || ||| ||||||   ||||||| | ||| U CG CG UGU GAUCCG   UACCCGG C GUG C   C  C   C      GAC       U -   G
Stem-loop sequence	GUCGUUGCAUCUGGGUGAAUGGGCCUGUCAUCGUCGGUGCUGGCCCAUCAGGCCUAGCUGUCGCCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK117483.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:605   GCAGCUAGGCCUGGUGGGCC   624 Target Full Sequence	1.5	Arabidopsis thaliana At5g48150 mRNA for putative SCARECROW gene regulator, complete cds, clone: RAFL17-10-L05	NA	coding protein	psRNATarget
BT025326.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:745   GCAGCUAGGCCUGGUGGGCC   764 Target Full Sequence	1.5	Arabidopsis thaliana At5g48150 mRNA, complete cds	NA	coding protein	psRNATarget
BX831005.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:886   GCAGCUAGGCCUGGUGGGCC   905 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS48ZD10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX831686.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:961   GCAGCUAGGCCUGGUGGGCC   980 Target Full Sequence	1.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZG07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK317252.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:929   GCAGCUAGGCCUGGUGGGCC   948 Target Full Sequence	1.5	Arabidopsis thaliana AT5G48150 mRNA, complete cds, clone: RAFL22-43-D17	NA	coding protein	psRNATarget
AF153443.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:874   GCAGCUAGGCCUGGUGGGCC   893 Target Full Sequence	1.5	Arabidopsis thaliana phytochrome A signal transduction 1 protein (PAT1) mRNA, complete cds	NA	coding protein	psRNATarget
AK317747.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:971   GCAGCUAGGCCUGGUGGGCC   990 Target Full Sequence	1.5	Arabidopsis thaliana AT5G48150 mRNA, complete cds, clone: RAFL22-04-F15	NA	coding protein	psRNATarget
NM_124189.6	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:1061   GCAGCUAGGCCUGGUGGGCC   1080 Target Full Sequence	1.5	Arabidopsis thaliana GRAS family transcription factor (PAT1), mRNA	GRAS family transcription factor(PAT1)	coding protein	psRNATarget
NM_001344761.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:1130   GCAGCUAGGCCUGGUGGGCC   1149 Target Full Sequence	1.5	Arabidopsis thaliana GRAS family transcription factor (PAT1), mRNA	GRAS family transcription factor(PAT1)	coding protein	psRNATarget
NM_203174.3	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:1141   GCAGCUAGGCCUGGUGGGCC   1160 Target Full Sequence	1.5	Arabidopsis thaliana GRAS family transcription factor (PAT1), mRNA	GRAS family transcription factor(PAT1)	coding protein	psRNATarget
NM_001344762.1	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =||||||||||||=|||||| targets:1165   GCAGCUAGGCCUGGUGGGCC   1184 Target Full Sequence	1.5	Arabidopsis thaliana GRAS family transcription factor (PAT1), mRNA	GRAS family transcription factor(PAT1)	coding protein	psRNATarget
NM_125555.5	ncRNA:20   UGUCGAUCCGGACUACCCGG   1   =*||*||||||||||||||| targets:339   GGAGGUAGGCCUGAUGGGCC   358 Target Full Sequence	2.0	Arabidopsis thaliana Oleosin family protein mRNA	Oleosin family protein(AT5G61610)	coding protein	psRNATarget