ncRNA ID | novel_ahy_miR1171 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B10:11743399-11743582 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 161 - AUACUGUAAUACACUUCAAAUGUC - 184 |
Stem-loop(if miRNA) |
--      --     A     U    GUAGAUUUUGUAG  A        --A   A  GAG  GUAUUGCAACAAGUGGGGGCGUGUUGGACAGGUGGCAAC   UAUUUG  GUGUA UUAUA GUAU             GU GGAAGUCA   CAC UG   GC                                       A   ||||||  ||||| ||||| ||||             || ||||||||   ||| ||   ||                                       U   GUAAAC  CACAU AAUGU CAUA             CA CCUUCAGU   UUG UA   CG                                       U CU      UU     -     -    ------------A  -        AAG   -  ---  GGGGAUAUACAAAGUUGUGCGGGGAGUGCACAACCGGUU |
Stem-loop sequence | UAUUUGGUGUAAUUAUAUGUAUGUAGAUUUUGUAGGUAGGAAGUCAACACAUGGAGGCGUAUUGCAACAAGUGGGGGCGUGUUGGACAGGUGGCAACAUUUUGGCCAACACGUGAGGGGCGUGUUGAAACAUAUAGGGGGCAUGUUGAAUGACUUCCACAAUACUGUAAUACACUUCAAAUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01007072.1 |
|
1.5 | TSA: Arachis hypogaea Unigene7079 mRNA sequence | NA | coding protein | psRNATarget |