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BaseInfo

ncRNA ID novel_ahy_miR1168
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:20069013-20069183 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 151 - AAUUAGGACUACUAGAUGUGU - 171
Stem-loop(if miRNA) --       AAAA              C  G     A                   A     -----AA   AAUUAAAGGGAGAAUU
  ACAUCUA    UUUUAAUUAACUAU AA AUAAU AAUUUAUGAAAUUAGAUCA AUUAA       CCU                U
  |||||||    |||||||||||||| || ||||| ||||||||||||||||||| |||||       |||
  UGUAGAU    AGGAUUAAUUGAUA UU UAUUA UUAAAUAUUUUAAUCUAGU UAAUU       AAC                G
UG       CAUC              A  G     A                   C     AAGGUUU   UCCUUAAGAUUAUGGA
Stem-loop sequence ACAUCUAAAAAUUUUAAUUAACUAUCAAGAUAAUAAAUUUAUGAAAUUAGAUCAAAUUAAAACCUAAUUAAAGGGAGAAUUUGAGGUAUUAGAAUUCCUCAAUUUGGAAUUAAUCUGAUCUAAUUUUAUAAAUUAAUUAUGUUAAUAGUUAAUUAGGACUACUAGAUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745528.1
ncRNA:21   UGUGUA--GAUCAUCAGGAUUAA   1
  ||||||--|||||||||||||||
targets:903   ACACAUACCUAGUAGUCCUAAUU   925

2.5 TSA: Arachis hypogaea CL7423Contig1.Arhy mRNA sequence NA coding protein psRNATarget