ncRNA ID | novel_ahy_miR1165 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B03:21132202-21132418 [-] |
Reference genome | Araip_v1.0 |
Source | SRR2922381 |
Length | 24 |
Mature sequence(if miRNA) | 194 - CAAUGAAAGAUGAAAACGCUGACA - 217 |
Stem-loop(if miRNA) |
-CA                          UACC    C      A                    C          C                    UCUU  GAG   UG    AUGAAAGAUGAAAACGCUGACAUAUG    CACA UAAAUC AAACUAAACUUGUACCCACG AAGAUGUCCU UGUGUGACAAAAGUACCCUG    UG   GGU  G    ||||||||||||||||||||||||||    |||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    ||   |||    UAUUUUCUACUUUUGUGACUGUAUAC    GUGU AUUUAG UUUGAUUUGAACAUGGGUGC UUCUAUAGGA GCACACUGUUUUCAUGGGAU    GC   CCG  A AGG                          UUAA    A      C                    A          A                    ----  --A   UG |
Stem-loop sequence | CAAUGAAAGAUGAAAACGCUGACAUAUGUACCCACACUAAAUCAAAACUAAACUUGUACCCACGCAAGAUGUCCUCUGUGUGACAAAAGUACCCUGUCUUUGGAGGGUUGGAGUGCCACGUAGGGUACUUUUGUCACACGAAGGAUAUCUUACGUGGGUACAAGUUUAGUUUCGAUUUAAUGUGAAUUCAUAUGUCAGUGUUUUCAUCUUUUAUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01028702.1 |
|
2.5 | TSA: Arachis hypogaea Unigene28720 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EZ722638.1 |
|
2.5 | TSA: Arachis hypogaea CL1Contig1654.Arhy mRNA sequence | NA | coding protein | psRNATarget |