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BaseInfo

ncRNA ID novel_ahy_miR1165
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:21132202-21132418 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 194 - CAAUGAAAGAUGAAAACGCUGACA - 217
Stem-loop(if miRNA) -CA                          UACC    C      A                    C          C                    UCUU  GAG   UG
   AUGAAAGAUGAAAACGCUGACAUAUG    CACA UAAAUC AAACUAAACUUGUACCCACG AAGAUGUCCU UGUGUGACAAAAGUACCCUG    UG   GGU  G
   ||||||||||||||||||||||||||    |||| |||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||||    ||   |||
   UAUUUUCUACUUUUGUGACUGUAUAC    GUGU AUUUAG UUUGAUUUGAACAUGGGUGC UUCUAUAGGA GCACACUGUUUUCAUGGGAU    GC   CCG  A
AGG                          UUAA    A      C                    A          A                    ----  --A   UG
Stem-loop sequence CAAUGAAAGAUGAAAACGCUGACAUAUGUACCCACACUAAAUCAAAACUAAACUUGUACCCACGCAAGAUGUCCUCUGUGUGACAAAAGUACCCUGUCUUUGGAGGGUUGGAGUGCCACGUAGGGUACUUUUGUCACACGAAGGAUAUCUUACGUGGGUACAAGUUUAGUUUCGAUUUAAUGUGAAUUCAUAUGUCAGUGUUUUCAUCUUUUAUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01028702.1
ncRNA:24   ACAGUCGCAAAAGUAGAAAGUAAC   1
  **|||*|||||||*||||||||||
targets:55   CUUCACCGUUUUCCUCUUUCAUUG   78

2.5 TSA: Arachis hypogaea Unigene28720 mRNA sequence NA coding protein psRNATarget
EZ722638.1
ncRNA:24   ACAGUCGCAAAAGUAGAAAGUAAC   1
  **|||*|||||||*||||||||||
targets:38   CUUCACCGUUUUCCUCUUUCAUUG   61

2.5 TSA: Arachis hypogaea CL1Contig1654.Arhy mRNA sequence NA coding protein psRNATarget