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BaseInfo

ncRNA ID novel_ahy_miR1162
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:104588677-104588759 [-]
Reference genome Araip_v1.0
Source SRR2922381;SRR1323745
Length 21
Mature sequence(if miRNA) 63 - UGGAGAAGCAGGGCACGUGCA - 83
Stem-loop(if miRNA) --        C            AAUUUUUUUU   UA   U
  UGGAGAAG AGGGCACGUGCA          UUU  AUU U
  |||||||| ||||||||||||          |||  ||| U
  ACCUCUUU UCUCGUGCACGU          AAA  UGA A
CA        U            --CUUUUGUU   GC   U
Stem-loop sequence UGGAGAAGCAGGGCACGUGCAAAUUUUUUUUUUUUAAUUUUUAUAGUCGAAAUUGUUUUCUGCACGUGCUCUUUUUCUCCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01000860.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  |||||||||||||||||||||
targets:89   UGCACGUGCCCUGCUUCUCCA   109

0.0 TSA: Arachis hypogaea Unigene861 mRNA sequence NA coding protein psRNATarget
EZ741099.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:729   CUUACGUGCCCUGCUUCUCCA   749

1.0 TSA: Arachis hypogaea CL4114Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01018285.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:243   CUUACGUGCCCUGCUUCUCCA   263

1.0 TSA: Arachis hypogaea Unigene18293 mRNA sequence NA coding protein psRNATarget
GAER01018302.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:570   CUUACGUGCCCUGCUUCUCCA   590

1.0 TSA: Arachis hypogaea Unigene18310 mRNA sequence NA coding protein psRNATarget
GAER01018287.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:553   CUUACGUGCCCUGCUUCUCCA   573

1.0 TSA: Arachis hypogaea Unigene18295 mRNA sequence NA coding protein psRNATarget
GAER01018306.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **=||||||||||||||||||
targets:769   CUUACGUGCCCUGCUUCUCCA   789

1.0 TSA: Arachis hypogaea Unigene18314 mRNA sequence NA coding protein psRNATarget
EZ722985.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*||||||||||||||||
targets:776   AGCAAGUGCCCUGCUUCUCCA   796

1.0 TSA: Arachis hypogaea CL1Contig2001.Arhy mRNA sequence NA coding protein psRNATarget
GAER01033688.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  *|||*||||||||||||||||
targets:769   AGCAAGUGCCCUGCUUCUCCA   789

1.0 TSA: Arachis hypogaea Unigene33710 mRNA sequence NA coding protein psRNATarget
GAER01015257.1
ncRNA:21   ACGUGCACGGGACGAAGAGGU   1
  **|||*||||||*||||||||
targets:206   CACACCUGCCCUUCUUCUCCA   226

2.5 TSA: Arachis hypogaea Unigene15265 mRNA sequence NA coding protein psRNATarget