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BaseInfo

ncRNA ID novel_ahy_miR1160
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:94283554-94283710 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 1 - AUGGAAGUAUGUUCGUAGAUGUGU - 24
Stem-loop(if miRNA) --     A  A       A              -A     C    UU   G    GUUUAAUAGAAGUGUCUUUAUAGA
  AUGGA GU UGUUCGU GAUGUGUCUAAUAA  AAUGU UUUU  AUA CUGU                        U
  ||||| || ||||||| ||||||||||||||  ||||| ||||  ||| ||||
  UAUCU CA ACAAGCA CUACACAGAUUAUU  UUAUA AAAA  UAU UAUA                        A
AG     A  C       C              AA     U    UU   G    UAUUUCUCUGUGUAGGUCUUUUAU
Stem-loop sequence AUGGAAGUAUGUUCGUAGAUGUGUCUAAUAAAAAUGUCUUUUUUAUAGCUGUGUUUAAUAGAAGUGUCUUUAUAGAUAUAUUUUCUGGAUGUGUCUCUUUAUAUAUGUAUUUAAAAUAUAUUAAUUAUUAGACACAUCCACGAACACACAUCUAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR546305.1
ncRNA:24   UGUGUAGAUGCUUGUAUGAAGGUA   1
  |||||||*|||||||*||||||||
targets:8   ACACAUCCACGAACACACUUCCAU   31

2.5 TSA: Arachis hypogaea Ahy.Unigene5750 mRNA sequence NA coding protein psRNATarget
GAER01035600.1
ncRNA:24   UGUGUAGAUGCUUGUAUGAAGGUA   1
  |||||||*|||||||*||||||||
targets:489   ACACAUCCACGAACACACUUCCAU   512

2.5 TSA: Arachis hypogaea Unigene35623 mRNA sequence NA coding protein psRNATarget