ncRNA ID | novel_ahy_miR1159 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B02:4036840-4037024 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922381 |
Length | 24 |
Mature sequence(if miRNA) | 162 - GAUUCGAACUAUAUAGAAAUGUCU - 185 |
Stem-loop(if miRNA) |
----                             UA          C      ---            ------                    UUUCC     AUUUCUAUAUAGUUCGAAUCUACCUAAUU  AACUGCAUUU CAUGUA   AUUCGAAUUACA      CACACACCCACUAAUUUGAA     A     |||||||||||||||||||||||||||||  |||||||||| ||||||   ||||||||||||      ||||||||||||||||||||     UAAAGAUAUAUCAAGCUUAGAUGGAUUAA  UUGACGUAAA GUACAU   UAAGCUUAAUGU      GUGUGUGGGUGAUUAAACUU     G UCUG                             GC          A      GUC            AUGUGC                    UGUUG |
Stem-loop sequence | AUUUCUAUAUAGUUCGAAUCUACCUAAUUUAAACUGCAUUUCCAUGUAAUUCGAAUUACACACACACCCACUAAUUUGAAUUUCCAGGUUGUUUCAAAUUAGUGGGUGUGUGCGUGUAUGUAAUUCGAAUCUGUACAUGAAAAUGCAGUUCGAAUUAGGUAGAUUCGAACUAUAUAGAAAUGUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01051535.1 |
|
2.0 | TSA: Arachis hypogaea Unigene51573 mRNA sequence | NA | coding protein | psRNATarget |