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BaseInfo

ncRNA ID novel_ahy_miR1159
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:4036840-4037024 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 162 - GAUUCGAACUAUAUAGAAAUGUCU - 185
Stem-loop(if miRNA) ----                             UA          C      ---            ------                    UUUCC
    AUUUCUAUAUAGUUCGAAUCUACCUAAUU  AACUGCAUUU CAUGUA   AUUCGAAUUACA      CACACACCCACUAAUUUGAA     A
    |||||||||||||||||||||||||||||  |||||||||| ||||||   ||||||||||||      ||||||||||||||||||||
    UAAAGAUAUAUCAAGCUUAGAUGGAUUAA  UUGACGUAAA GUACAU   UAAGCUUAAUGU      GUGUGUGGGUGAUUAAACUU     G
UCUG                             GC          A      GUC            AUGUGC                    UGUUG
Stem-loop sequence AUUUCUAUAUAGUUCGAAUCUACCUAAUUUAAACUGCAUUUCCAUGUAAUUCGAAUUACACACACACCCACUAAUUUGAAUUUCCAGGUUGUUUCAAAUUAGUGGGUGUGUGCGUGUAUGUAAUUCGAAUCUGUACAUGAAAAUGCAGUUCGAAUUAGGUAGAUUCGAACUAUAUAGAAAUGUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01051535.1
ncRNA:24   UC---UGUAAAGAUAUAUCAAGCUUAG   1
  ||---||||||=||||||||||||||*
targets:140   AGUUCACAUUUUUAUAUAGUUCGAAUA   166

2.0 TSA: Arachis hypogaea Unigene51573 mRNA sequence NA coding protein psRNATarget