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BaseInfo

ncRNA ID novel_ahy_miR1158
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:1007330-1007447 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 95 - CUGACUUUCACAAAACUUGGACGG - 118
Stem-loop(if miRNA) --        C                   C   --   -A    G  A    -GAC   U
  CUGACUUU ACAAAACUUGGACGGAUCA UCC  CUG  CAGA GC UUUG    GGA C
  |||||||| ||||||||||||||||||| |||  |||  |||| || ||||    |||
  GACUGGAA UGUUUUGAACCUGCCUAGU AGG  GGC  GUUU CG AGGC    CCU A
GG        A                   C   AA   AG    A  G    AGUC   G
Stem-loop sequence CUGACUUUCACAAAACUUGGACGGAUCACUCCCUGACAGAGGCAUUUGGACGGAUCAGUCCCUGACGGAGGCAUUUGGACGGAAGGACUGAUCCGUCCAAGUUUUGUAAAGGUCAGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR575962.1
ncRNA:24   GGCAGGUUCAAAACACUUUCAGUC   1
  ||||||||*|||||||||=|||||
targets:243   CCGUCCAAAUUUUGUGAAGGUCAG   266

2.5 TSA: Arachis hypogaea Ahy.Unigene38999 mRNA sequence NA coding protein psRNATarget