ncRNA ID | novel_ahy_miR1148 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B10:124308932-124309102 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAGGCUUAUGACCUCUUUCCA - 21 |
Stem-loop(if miRNA) |
--           C       C          ----   -U  --A   G     UUAA       ------U         -----UU    GG   UAGGCUUAUGA CUCUUUC AUCGCAUUAU    CAC  CG   AUU UGAGC    UUUCUUU       AUUGGUAAU       CUAU  U   ||||||||||| ||||||| ||||||||||    |||  ||   ||| |||||    |||||||       |||||||||       ||||  G   AUCCGAAUAUU GAGAAAG UAGUGUAGUG    GUG  GU   UGA ACUCG    AAAGAAG       UGAUCAUUA       GAUA  U UC           U       U          UGCU   UU  GUG   G     --UA       UAGUGUU         CGUAGUU    AA |
Stem-loop sequence | UAGGCUUAUGACCUCUUUCCAUCGCAUUAUCACUCGAAUUGUGAGCUUAAUUUCUUUUAUUGGUAAUUUCUAUGGUGUAAAUAGUUGAUGCAUUACUAGUUUGUGAUGAAGAAAAUGCUCAGAGUGUGUGUUGUGUCGUGUGAUGUGAUUGAAAGAGUUUAUAAGCCUACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JR582445.1 |
|
2.5 | TSA: Arachis hypogaea Ahy.Unigene48325 mRNA sequence | NA | coding protein | psRNATarget |