Search result

BaseInfo

ncRNA ID novel_ahy_miR1148
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:124308932-124309102 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UAGGCUUAUGACCUCUUUCCA - 21
Stem-loop(if miRNA) --           C       C          ----   -U  --A   G     UUAA       ------U         -----UU    GG
  UAGGCUUAUGA CUCUUUC AUCGCAUUAU    CAC  CG   AUU UGAGC    UUUCUUU       AUUGGUAAU       CUAU  U
  ||||||||||| ||||||| ||||||||||    |||  ||   ||| |||||    |||||||       |||||||||       ||||  G
  AUCCGAAUAUU GAGAAAG UAGUGUAGUG    GUG  GU   UGA ACUCG    AAAGAAG       UGAUCAUUA       GAUA  U
UC           U       U          UGCU   UU  GUG   G     --UA       UAGUGUU         CGUAGUU    AA
Stem-loop sequence UAGGCUUAUGACCUCUUUCCAUCGCAUUAUCACUCGAAUUGUGAGCUUAAUUUCUUUUAUUGGUAAUUUCUAUGGUGUAAAUAGUUGAUGCAUUACUAGUUUGUGAUGAAGAAAAUGCUCAGAGUGUGUGUUGUGUCGUGUGAUGUGAUUGAAAGAGUUUAUAAGCCUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR582445.1
ncRNA:21   ACCUUUCUCCAGUAUUCGGAU   1
  |||||||*||*||||||||||
targets:201   UGGAAAGUGGCCAUAAGCCUA   221

2.5 TSA: Arachis hypogaea Ahy.Unigene48325 mRNA sequence NA coding protein psRNATarget