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BaseInfo

ncRNA ID novel_ahy_miR1145
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:134653253-134653389 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AGGUAGAAACUCAGGUGCAGUCGA - 24
Stem-loop(if miRNA) --                 C      C    C            AC   AAUC     A    UUU  C
  AGGUAGAAACUCAGGUG AGUCGA UUCA GUGAAGUUGAUA  UGA    CGUUA AUGA   GA U
  ||||||||||||||||| |||||| |||| ||||||||||||  |||    ||||| ||||   || A
  UUCAUUUUUGAGUCUAC UCAGCU AAGU CACUUCAAUUAU  ACU    GCAAU UGCU   CU A
AA                 U      A    A            GA   CUCA     C    --U  A
Stem-loop sequence AGGUAGAAACUCAGGUGCAGUCGACUUCACGUGAAGUUGAUAACUGAAAUCCGUUAAAUGAUUUGACUAAAUCUUCGUCUAACGACUCUCAAGUAUUAACUUCACAUGAAAUCGACUUCAUCUGAGUUUUUACUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01053760.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  *|*|||||||||||||||||||||
targets:130   CCAACUGCACCUGAGUUUCUACCU   153

0.0 TSA: Arachis hypogaea Unigene53800 mRNA sequence NA coding protein psRNATarget
GAER01020058.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |*||*|||||||||||||||||||
targets:2298   UAGAAUGCACCUGAGUUUCUACCU   2321

0.0 TSA: Arachis hypogaea Unigene20067 mRNA sequence NA coding protein psRNATarget
GAER01057592.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |=*|||||||=|||||||||||||
targets:176   UUAACUGCACUUGAGUUUCUACCU   199

1.0 TSA: Arachis hypogaea Unigene57638 mRNA sequence NA coding protein psRNATarget
JR580642.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |=*=||||||=|||||||||||||
targets:184   UUAGCUGCACUUGAGUUUCUACCU   207

1.0 TSA: Arachis hypogaea Ahy.Unigene46522 mRNA sequence NA coding protein psRNATarget
JR570363.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  ||||*||||||||||||||*||||
targets:160   UCGAAUGCACCUGAGUUUCCACCU   183

1.5 TSA: Arachis hypogaea Ahy.Unigene30687 mRNA sequence NA coding protein psRNATarget
EZ747471.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  *||-|||||||||||||||*||||
targets:613   ACG-CUGCACCUGAGUUUCAACCU   635

1.5 TSA: Arachis hypogaea CL20093Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01044862.1
ncRNA:19   ACGUGGACUCAAAGAUGGA   1
  ||||||||||||||*||||
targets:1   UGCACCUGAGUUUCCACCU   19

1.5 TSA: Arachis hypogaea Unigene44896 mRNA sequence NA coding protein psRNATarget
JR546132.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  ||||||||||=||||||||||*||
targets:149   UCGACUGCACUUGAGUUUCUAGCU   172

2.5 TSA: Arachis hypogaea Ahy.Unigene5573 mRNA sequence NA coding protein psRNATarget
JR559052.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |||||||||||||||||||*|||*
targets:80   UCGACUGCACCUGAGUUUCCACCA   103

2.5 TSA: Arachis hypogaea Ahy.Unigene18963 mRNA sequence NA coding protein psRNATarget
GAER01005312.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  *=|||||=|||||||||||*||||
targets:15   AUGACUGUACCUGAGUUUCCACCU   38

2.5 TSA: Arachis hypogaea Unigene5317 mRNA sequence NA coding protein psRNATarget
EZ752265.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  ||*|||||||=|||*|||||||||
targets:853   UCAACUGCACUUGAAUUUCUACCU   876

2.5 TSA: Arachis hypogaea CL2787Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01013535.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |=*|||||||=|||*|||||||||
targets:78   UUAACUGCACUUGAAUUUCUACCU   101

2.5 TSA: Arachis hypogaea Unigene13543 mRNA sequence NA coding protein psRNATarget
EZ721080.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  *|*|||||||*|||||||=|||||
targets:496   ACAACUGCACGUGAGUUUUUACCU   519

2.5 TSA: Arachis hypogaea CL1Contig96.Arhy mRNA sequence NA coding protein psRNATarget
GAER01034339.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  *|*|||||||*|||||||=|||||
targets:493   ACAACUGCACGUGAGUUUUUACCU   516

2.5 TSA: Arachis hypogaea Unigene34362 mRNA sequence NA coding protein psRNATarget
JR571563.1
ncRNA:24   AGCUGACGUGGACUCAAAGAUGGA   1
  |=|*||*||=*|||||||||||||
targets:407   UUGUCUUCAUGUGAGUUUCUACCU   430

3.0 TSA: Arachis hypogaea Ahy.Unigene32964 mRNA sequence NA coding protein psRNATarget
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