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BaseInfo

ncRNA ID novel_ahy_miR1142
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:23520844-23520975 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - AAUUUAGGUGCAGUCGACUUC - 21
Stem-loop(if miRNA) --                           A                UA   A    AAAUUUAGUC
  AAUUUAGGUGCAGUCGACUUCAUGUGA GUUGAUAGCUGAGAGC  UUA AUGA          A
  ||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||
  UUGAGUCUAUGUCAGCUGAAGUGUACU CAACUAUUGACUCUCG  AAU UACU          A
CU                           C                GC   C    AAACUAACUA
Stem-loop sequence AAUUUAGGUGCAGUCGACUUCAUGUGAAGUUGAUAGCUGAGAGCUAUUAAAUGAAAAUUUAGUCAAAUCAAUCAAAUCAUCUAACGGCUCUCAGUUAUCAACCUCAUGUGAAGUCGACUGUAUCUGAGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01053414.1
ncRNA:21   CUUCAGCUGACGUGGAUUUAA   1
  |||||=|||||||||||||||
targets:69   GAAGUUGACUGCACCUAAAUU   89

1.0 TSA: Arachis hypogaea Unigene53453 mRNA sequence NA coding protein psRNATarget
JR585639.1
ncRNA:21   CUUCAGCUGACGUGGAUUUAA   1
  |||||=|||||||||||||||
targets:82   GAAGUUGACUGCACCUAAAUU   102

1.0 TSA: Arachis hypogaea Ahy.Unigene52188 mRNA sequence NA coding protein psRNATarget
GAER01054132.1
ncRNA:21   CUUCAGCUGACGUGGAUUUAA   1
  ||||||||||||||||=||||
targets:199   GAAGUCGACUGCACCUGAAUU   219

1.5 TSA: Arachis hypogaea Unigene54173 mRNA sequence NA coding protein psRNATarget
GAER01013079.1
ncRNA:21   CUUCAGCUGACGUGGAUUUAA   1
  |||||=*||||||||||||||
targets:351   GAAGUUAACUGCACCUAAAUU   371

2.0 TSA: Arachis hypogaea Unigene13087 mRNA sequence NA coding protein psRNATarget