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BaseInfo

ncRNA ID novel_ahy_miR1139
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:89930768-89930817 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 30 - CAGAGACUGGAACUGAGACUG - 50
Stem-loop(if miRNA) CAG    -   A      A  G  
   AGAC UGG ACUGAG CU UGA
   |||| ||| |||||| || ||G
   UUUG AUU UGACUC GA ACA
UUG    U   A      A  G  
Stem-loop sequence CAGAGACUGGAACUGAGACUGUGAGACAGAGACUCAGUAUUAUGUUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR551015.1
ncRNA:21   GUCAGAGUCAAGGUCAGAGAC   1
  ||||*|||||||=||||||||
targets:424   CAGUAUCAGUUCUAGUCUCUG   444

2.5 TSA: Arachis hypogaea Ahy.Unigene10644 mRNA sequence NA coding protein psRNATarget
GAER01030091.1
ncRNA:21   GUCAGAGUCAAGGUCAGAGAC   1
  ||||*|||||||=||||||||
targets:1569   CAGUAUCAGUUCUAGUCUCUG   1589

2.5 TSA: Arachis hypogaea Unigene30111 mRNA sequence NA coding protein psRNATarget