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BaseInfo

ncRNA ID novel_ahy_miR1138
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:134584674-134584767 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 71 - CGGUUAAAACAACUGGAACACCGG - 94
Stem-loop(if miRNA) --                           CUG     UAAAAAA      
  GGUGUUCCAGUUGUUUUAACCGUUGAU   AAUUA       AUAUAUA
  |||||||||||||||||||||||||||   |||||       ||||||A
  CCACAAGGUCAACAAAAUUGGCAACUA   UUAAU       UAUAUAU
GG                           AAA     -------      
Stem-loop sequence GGUGUUCCAGUUGUUUUAACCGUUGAUCUGAAUUAUAAAAAAAUAUAUAAUAUAUAUUAAUUAAAAUCAACGGUUAAAACAACUGGAACACCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR570006.1
ncRNA:24   GGCCACAAGGUCAACAAAAUUGGC   1
  ||||||||||||||||||||||=|
targets:247   CCGGUGUUCCAGUUGUUUUAACUG   270

1.5 TSA: Arachis hypogaea Ahy.Unigene30319 mRNA sequence NA coding protein psRNATarget
GAER01037048.1
ncRNA:24   GGCCACAAGGUCAACAAAAUUGGC   1
  |=||||||||||||*|||||||||
targets:395   CUGGUGUUCCAGUUAUUUUAACCG   418

1.5 TSA: Arachis hypogaea Unigene37072 mRNA sequence NA coding protein psRNATarget