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BaseInfo

ncRNA ID ath-miRf10430-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UCCAGCGACAUGCAAACGAACAA - NA
Stem-loop(if miRNA)                C         -        C     A  G    -      CAGC          CGCAAUUUU          A
AAGUUGUUCGUUUGC UGUCGCUGG UUCAGCGA CAAAA UA CGAU AAUCGC    GAUCAGCGAC         UGGUCGCUGA A
||||||||||||||| ||||||||| |||||||| ||||| || |||| ||||||    ||||||||||         |||||||||| U
UUCAACAAGCAAACG ACAGCGACC AGGUCGCU GUUUU AU GCUG UUAGCG    UUGGUCGCUG         ACUAGCGAUU U
               U         U        A     C  A    A      -AUU          ---------          U
Stem-loop sequence AAGUUGUUCGUUUGCCUGUCGCUGGUUCAGCGACCAAAAAUAGCGAUAAUCGCCAGCGAUCAGCGACCGCAAUUUUUGGUCGCUGAAAUUUUUAGCGAUCAGUCGCUGGUUUUAGCGAUUAGUCGAUACUUUUGAUCGCUGGAUCCAGCGACAUGCAAACGAACAACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AF107726.1
ncRNA:23   AACAAGCAAACGUACAGCGACCU   1
  *|||||||||||*|||||||||*
targets:2167   CUGUUCGUUUGCCUGUCGCUGGC   2189

2.5 Arabidopsis thaliana cyclic nucleotide gated channel (CNGC4) mRNA, complete cds NA coding protein psRNATarget