ncRNA ID | ath-miRf10430-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UCCAGCGACAUGCAAACGAACAA - NA |
Stem-loop(if miRNA) |
               C         -        C     A  G    -      CAGC          CGCAAUUUU          A AAGUUGUUCGUUUGC UGUCGCUGG UUCAGCGA CAAAA UA CGAU AAUCGC    GAUCAGCGAC         UGGUCGCUGA A ||||||||||||||| ||||||||| |||||||| ||||| || |||| ||||||    ||||||||||         |||||||||| U UUCAACAAGCAAACG ACAGCGACC AGGUCGCU GUUUU AU GCUG UUAGCG    UUGGUCGCUG         ACUAGCGAUU U                U         U        A     C  A    A      -AUU          ---------          U |
Stem-loop sequence | AAGUUGUUCGUUUGCCUGUCGCUGGUUCAGCGACCAAAAAUAGCGAUAAUCGCCAGCGAUCAGCGACCGCAAUUUUUGGUCGCUGAAAUUUUUAGCGAUCAGUCGCUGGUUUUAGCGAUUAGUCGAUACUUUUGAUCGCUGGAUCCAGCGACAUGCAAACGAACAACUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AF107726.1 |
|
2.5 | Arabidopsis thaliana cyclic nucleotide gated channel (CNGC4) mRNA, complete cds | NA | coding protein | psRNATarget |