ncRNA ID | novel_ahy_miR1133 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B10:134547788-134547896 [+] |
Reference genome | Araip_v1.0 |
Source | SRR1323745 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UGAGGUACUGAGACAGAGACUGGG - 24 |
Stem-loop(if miRNA) |
--U            ---C      UG      U    -CUC      -  G    UU    GAGGUACUGAGA    AGAGAC  GGAGAC GAGA    AGUAUU GU UUUG  A    ||||||||||||    ||||||  |||||| ||||    |||||| || ||||    CUCCAUGACUUU    UCUCUG  UCUCUG CUUU    UCAUGG CA AGAC  G AAC            AAAA      --      U    AAAA      U  G    UU |
Stem-loop sequence | UGAGGUACUGAGACAGAGACUGGGAGACUGAGACUCAGUAUUGUGUUUGUUAGUUCAGAGACUGGUACUAAAAUUUCUGUCUCUGUCUCUAAAAUUUCAGUACCUCCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01008348.1 |
|
0.0 | TSA: Arachis hypogaea Unigene8355 mRNA sequence | NA | coding protein | psRNATarget | |||||||||
GAER01013891.1 |
|
0.0 | TSA: Arachis hypogaea Unigene13899 mRNA sequence | NA | coding protein | psRNATarget |