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BaseInfo

ncRNA ID novel_ahy_miR1133
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:134547788-134547896 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - UGAGGUACUGAGACAGAGACUGGG - 24
Stem-loop(if miRNA) --U            ---C      UG      U    -CUC      -  G    UU
   GAGGUACUGAGA    AGAGAC  GGAGAC GAGA    AGUAUU GU UUUG  A
   ||||||||||||    ||||||  |||||| ||||    |||||| || ||||
   CUCCAUGACUUU    UCUCUG  UCUCUG CUUU    UCAUGG CA AGAC  G
AAC            AAAA      --      U    AAAA      U  G    UU
Stem-loop sequence UGAGGUACUGAGACAGAGACUGGGAGACUGAGACUCAGUAUUGUGUUUGUUAGUUCAGAGACUGGUACUAAAAUUUCUGUCUCUGUCUCUAAAAUUUCAGUACCUCCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01008348.1
ncRNA:24   GGGUCAGAGACAGAGUCAUGGAGU   1
  |=||||||||||||||||||||||
targets:103   CUCAGUCUCUGUCUCAGUACCUCA   126

0.0 TSA: Arachis hypogaea Unigene8355 mRNA sequence NA coding protein psRNATarget
GAER01013891.1
ncRNA:24   GGGUCAGAGACAGAGUCAUGGAGU   1
  *=||*|||||||||||||||||||
targets:2598   GUCAAUCUCUGUCUCAGUACCUCA   2621

0.0 TSA: Arachis hypogaea Unigene13899 mRNA sequence NA coding protein psRNATarget