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BaseInfo

ncRNA ID novel_ahy_miR1129
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:4695533-4695702 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - AAUUAGGACUACUAGAUGUGU - 21
Stem-loop(if miRNA)       -A  -           ACU             A           U           AA  U       A A  AC UG G
ACACAU  GG AGUCUUAAUUG   AUUAGCAUGAUAA UUUAUGAAAUU GAUCAAAUCAA  CC AAUUGAG G GA  U  A G
||||||  || |||||||||||   ||||||||||||| ||||||||||| |||||||||||  || ||||||| | ||  |  |
UGUGUA  UC UCAGGAUUAAC   UGAUUGUACUAUU AAAUACUUUAA CUAGUUUAGUU  GG UUAAUUC C CU  G  U C
      GA  A           CAC             C           U           GG  U       - -  AA GU A
Stem-loop sequence ACACAUAGGAGUCUUAAUUGACUAUUAGCAUGAUAAAUUUAUGAAAUUUGAUCAAAUCAAAACCUAAUUGAGAGAGAACUUGAGGCAUUGGAAUCCCUUAAUUUGGGGUUGAUUUGAUCUAAUUUCAUAAACUUAUCAUGUUAGUCACCAAUUAGGACUACUAGAUGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745528.1
ncRNA:21   UGUGUA--GAUCAUCAGGAUUAA   1
  ||||||--|||||||||||||||
targets:903   ACACAUACCUAGUAGUCCUAAUU   925

2.5 TSA: Arachis hypogaea CL7423Contig1.Arhy mRNA sequence NA coding protein psRNATarget