Search result

BaseInfo

ncRNA ID	ath-miRf10429-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - UUGAAGGACCUGAAGCUAUGCU - NA
Stem-loop(if miRNA)	U    C            C  UA                    CCUUCAACAAAAAUACCCCCCUCUU       GACA GGAAGCAUAGCU CA  UCCUUCAAUGGAGGUGUGGU                         GAAACU  |||| |||||||||||| ||  ||||||||||||||||||||                         |||||C  CUGU CCUUCGUAUCGA GU  AGGAAGUUACCUCCACACCA                         CUUUGU A    U            A  CC                    -------------------------
Stem-loop sequence	UGACACGGAAGCAUAGCUCCAUAUCCUUCAAUGGAGGUGUGGUCCUUCAACAAAAAUACCCCCCUCUUGAAACUCUGUUUCACCACACCUCCAUUGAAGGACCUGAAGCUAUGCUUCCUUGUCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AF370291.1	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:546   UCCCUAGCUUCAGGUCCUUCUA   567 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At1g09750) mRNA, partial cds	NA	coding protein	psRNATarget
BT002332.1	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:767   UCCCUAGCUUCAGGUCCUUCUA   788 Target Full Sequence	2.5	Arabidopsis thaliana clone C104927 unknown protein (At1g09750) mRNA, complete cds	NA	coding protein	psRNATarget
BX815383.1	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:791   UCCCUAGCUUCAGGUCCUUCUA   812 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS56ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX815490.1	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:791   UCCCUAGCUUCAGGUCCUUCUA   812 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS66ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY088375.1	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:807   UCCCUAGCUUCAGGUCCUUCUA   828 Target Full Sequence	2.5	Arabidopsis thaliana clone 6295 mRNA, complete sequence	NA	coding protein	psRNATarget
NM_100847.3	ncRNA:22   UCGUAUCGAAGUCCAGGAAGUU   1   **|*||||||||||||||||*| targets:807   UCCCUAGCUUCAGGUCCUUCUA   828 Target Full Sequence	2.5	Arabidopsis thaliana Eukaryotic aspartyl protease family protein mRNA	Eukaryotic aspartyl protease family protein(AT1G09750)	coding protein	psRNATarget