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BaseInfo

ncRNA ID novel_ahy_miR1125
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:150773-150843 [-]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - GGGGACUGAAAUUUUUAGAGACGG - 24
Stem-loop(if miRNA) --   C      -       A UU A  --A   C A
  GUC CUAAAA UUUCAGU U  C GU   CCU C A
  ||| |||||| ||||||| |  | ||   ||| | A
  CAG GAUUUU AAAGUCA G  G CA   GGA G A
GG   A      U       - GG A  CAG   U A
Stem-loop sequence GUCCCUAAAAUUUCAGUAUUUCAGUACCUCCAAAAAGUAGGGACACAGGGGACUGAAAUUUUUAGAGACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ733438.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  ||*|=*|*||||||||||||||||
targets:77   CCAUUCCCAAAAAUUUCAGUCCCC   100

2.0 TSA: Arachis hypogaea CL1Contig12454.Arhy mRNA sequence NA coding protein psRNATarget
GAER01027225.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  ||*|=*|*||||||||||||||||
targets:149   CCAUUCCCAAAAAUUUCAGUCCCC   172

2.0 TSA: Arachis hypogaea Unigene27243 mRNA sequence NA coding protein psRNATarget
JR571617.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:242   AUAUUUCCAAGAAUUUCAGUCCCA   265

3.0 TSA: Arachis hypogaea Ahy.Unigene33085 mRNA sequence NA coding protein psRNATarget
JR559484.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:218   AUAUUUCCAAGAAUUUCAGUCCCA   241

3.0 TSA: Arachis hypogaea Ahy.Unigene19419 mRNA sequence NA coding protein psRNATarget
GAER01027146.1
ncRNA:24   GGCAGAGAUUUUUAAAGUCAGGGG   1
  *=*|=||*||=||||||||||||*
targets:331   AUAUUUCCAAGAAUUUCAGUCCCA   354

3.0 TSA: Arachis hypogaea Unigene27163 mRNA sequence NA coding protein psRNATarget