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BaseInfo

ncRNA ID novel_ahy_miR1123
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:41001294-41001400 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - UCAGCACAAAGGGACAGAAUG - 21
Stem-loop(if miRNA) --    C                     -----CAA     GAUUUAGUGUGAUUC
  UCAG ACAAAGGGACAGAAUGGUAAU        ACUAG               U
  |||| |||||||||||||||||||||        |||||
  AGUU UGUUUCCCUGUCUUAUCAUUA        CAGUU               U
AA    C                     AAACGUUC     CAUAAACUGAUGAUC
Stem-loop sequence UCAGCACAAAGGGACAGAAUGGUAAUCAAACUAGGAUUUAGUGUGAUUCUUCUAGUAGUCAAAUACUUGACCUUGCAAAAUUACUAUUCUGUCCCUUUGUCUUGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ753964.1
ncRNA:21   GUAAGACAGGGAAACACGACU   1
  |||||||||||||||||||||
targets:35   CAUUCUGUCCCUUUGUGCUGA   55

0.0 TSA: Arachis hypogaea CL12022Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR579532.1
ncRNA:21   GUAAGACAGGGAAACACGACU   1
  |||||||||||||||||||||
targets:89   CAUUCUGUCCCUUUGUGCUGA   109

0.0 TSA: Arachis hypogaea Ahy.Unigene44917 mRNA sequence NA coding protein psRNATarget
EZ724172.1
ncRNA:21   GUAAGACAGGGAAACACGACU   1
  =*||=|*||||||||||||||
targets:144   UUUUUUCUCCCUUUGUGCUGA   164

2.0 TSA: Arachis hypogaea CL1Contig3188.Arhy mRNA sequence NA coding protein psRNATarget