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BaseInfo

ncRNA ID novel_ahy_miR1122
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:30229964-30230003 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 20
Mature sequence(if miRNA) 21 - UUGUGGCUCCUGUGGAUAGG - 40
Stem-loop(if miRNA) ---UG     A U      U
     UCACA G GUCAUA U
     ||||| | |||||| U
     GGUGU C CGGUGU U
GGAUA     C U      U
Stem-loop sequence UGUCACAAGUGUCAUAUUUUUUGUGGCUCCUGUGGAUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01017354.1
ncRNA:20   GGAUAGGUGUCCUCGGUGUU   1
  ||||||||||||||||||||
targets:743   CCUAUCCACAGGAGCCACAA   762

0.0 TSA: Arachis hypogaea Unigene17362 mRNA sequence NA coding protein psRNATarget
GAER01027576.1
ncRNA:20   GGAUAGGUGUCCUCGGUGUU   1
  ||||||||||||||||||||
targets:1126   CCUAUCCACAGGAGCCACAA   1145

0.0 TSA: Arachis hypogaea Unigene27594 mRNA sequence NA coding protein psRNATarget
JR555588.1
ncRNA:20   GGAUAGGUGUCCUCGGUGUU   1
  **||||||||*|||||||||
targets:182   GGUAUCCACAAGAGCCACAA   201

2.5 TSA: Arachis hypogaea Ahy.Unigene15386 mRNA sequence NA coding protein psRNATarget
GAER01028555.1
ncRNA:20   GGAUAGGUGUCCUCGGUGUU   1
  =||*|||||||||*||||||
targets:275   UCUCUCCACAGGAUCCACAA   294

2.5 TSA: Arachis hypogaea Unigene28573 mRNA sequence NA coding protein psRNATarget
GAER01033484.1
ncRNA:20   GGAUAGGUGUCCUCGGUGUU   1
  ||*|||*||||||||||||*
targets:866   CCAAUCAACAGGAGCCACAU   885

3.0 TSA: Arachis hypogaea Unigene33506 mRNA sequence NA coding protein psRNATarget