Search result

BaseInfo

ncRNA ID novel_ahy_miR1120
Species Arachis hypogaea
Class miRNA
Genome position Araip.B08:3419086-3419176 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 19
Mature sequence(if miRNA) 73 - CGCAGGAGAGAUGGCGCUA - 91
Stem-loop(if miRNA) --    G             AU  ---     A   -    -UA   U
  CGCA GAGAGAUGGCGCU  CA   CUUGC UCC AUCC   CCA C
  |||| |||||||||||||  ||   ||||| ||| ||||   ||| C
  GCGU UUCUCUACUGCGA  GU   GAACG AGG UGGG   GGU A
AU    G             CC  CUG     -   A    UAC   U
Stem-loop sequence CGCAGGAGAGAUGGCGCUAUCACUUGCAUCCAUCCUACCAUCCAUUGGCAUGGGUAGGAGCAAGGUCUGCCAGCGUCAUCUCUUGUGCGUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ745660.1
ncRNA:19   AUCGCGGUAGAGAGGACGC   1
  ||||*|||||||||||||*
targets:326   UAGCCCCAUCUCUCCUGCU   344

2.0 TSA: Arachis hypogaea CL8131Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR552915.1
ncRNA:19   AUCGCGGUAGAGAGGACGC   1
  ||||*|||||||||||||*
targets:1674   UAGCCCCAUCUCUCCUGCU   1692

2.0 TSA: Arachis hypogaea Ahy.Unigene12617 mRNA sequence NA coding protein psRNATarget
KC355782.1
ncRNA:19   AUCGCGGUAGAGAGGACGC   1
  *=|=|||||||||||||||
targets:190   CGGUGCCAUCUCUCCUGCG   208

3.0 Arachis hypogaea clone Unigene3567 hypothetical protein mRNA, partial cds NA coding protein psRNATarget
JR541178.1
ncRNA:19   AUCGCGGUAGAGAGGACGC   1
  *=|=|||||||||||||||
targets:331   CGGUGCCAUCUCUCCUGCG   349

3.0 TSA: Arachis hypogaea Ahy.Unigene479 mRNA sequence NA coding protein psRNATarget