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BaseInfo

ncRNA ID novel_ahy_miR1117
Species Arachis hypogaea
Class miRNA
Genome position Araip.B07:98958342-98958418 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 20
Mature sequence(if miRNA) 58 - UUGGCAUUCUGUCCACCUCC - 77
Stem-loop(if miRNA) --      U C            CC  UCUUCAUUCU     A
  UUGGCA U UGUCCACCUCCU  GA          UUUUG C
  |||||| | ||||||||||||  ||          |||||
  AACCGU A ACAGGUGGAGGG  CU          AAAAC A
AC      C U            UU  ---------U     U
Stem-loop sequence UUGGCAUUCUGUCCACCUCCUCCGAUCUUCAUUCUUUUUGACAUCAAAAUUCUUGGGAGGUGGACAUACUGCCAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KC355793.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:415   GGAGGUAGACAGAAUGCCAA   434

1.0 Arachis hypogaea clone Contig15234 F-box family protein 6 mRNA, partial cds NA coding protein psRNATarget
JR579735.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1208   GGAGGUAGACAGAAUGCCAA   1227

1.0 TSA: Arachis hypogaea Ahy.Unigene45441 mRNA sequence NA coding protein psRNATarget
GAER01031180.1
ncRNA:20   CCUCCACCUGUCUUACGGUU   1
  ||||||*|||||||||||||
targets:1328   GGAGGUAGACAGAAUGCCAA   1347

1.0 TSA: Arachis hypogaea Unigene31201 mRNA sequence NA coding protein psRNATarget