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BaseInfo

ncRNA ID novel_ahy_miR1113
Species Arachis hypogaea
Class miRNA
Genome position Araip.B07:119691711-119691797 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 1 - CAGAGACAGAAAGACUGAGACUAA - 24
Stem-loop(if miRNA) --       A            C A         AUACUAA    UA
  CAGAGAC GAAAGACUGAGA U AGAGAUAGA       GAUU  U
  ||||||| |||||||||||| | |||||||||       ||||
  GUCUCUG CUUUUUGAUUCU A UCUCUGUCU       CUAA  U
CU       C            A C         -------    CU
Stem-loop sequence CAGAGACAGAAAGACUGAGACUAAGAGAUAGAAUACUAAGAUUUAUUUCAAUCUCUGUCUCUCAAUCUUAGUUUUUCCGUCUCUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01008190.1
ncRNA:24   AAUCAGAGUCAGAAAGACAGAGAC   1
  |*||||||||||||||*|||||||
targets:145   UCAGUCUCAGUCUUUCCGUCUCUG   168

1.5 TSA: Arachis hypogaea Unigene8197 mRNA sequence NA coding protein psRNATarget
GAER01005543.1
ncRNA:24   AAUCAGAGUCAGAAAGACAGAGAC   1
  |*||||||*||||||||||||=||
targets:28   UCAGUCUCUGUCUUUCUGUCUUUG   51

2.5 TSA: Arachis hypogaea Unigene5548 mRNA sequence NA coding protein psRNATarget