Search result

BaseInfo

ncRNA ID	novel_ahy_miR1111
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B07:5041073-5041158 [+]
Reference genome	Araip_v1.0
Source	SRR2922381
Length	21
Mature sequence(if miRNA)	66 - CUUGGAUUGGAAAAUUAUGCC - 86
Stem-loop(if miRNA)	--          AAU         -AU      ---G    AACU   CAUAAUUUUC   UCCAAGGCA   CAUGAU    GAGC    C   ||||||||||   |||||||||   ||||||    ||||   GUAUUAAAAG   AGGUUCCGU   GUACUG    UUCG    U CC          GUU         AAC      ACUA    ACUU
Stem-loop sequence	CAUAAUUUUCAAUUCCAAGGCAAUCAUGAUGGAGCAACUCUUUCAGCUUAUCAGUCAUGCAAUGCCUUGGAUUGGAAAAUUAUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01052717.1	ncRNA:21   CCGUAUUAAAAGGUUAGGUUC   1   ||||||||||||||||||||| targets:186   GGCAUAAUUUUCCAAUCCAAG   206 Target Full Sequence	0.0	TSA: Arachis hypogaea Unigene52755 mRNA sequence	NA	coding protein	psRNATarget
GAER01033234.1	ncRNA:21   CCGUAUUAAAAGGUUAGGUUC   1   ||||||||||||||*|||||| targets:192   GGCAUAAUUUUCCAUUCCAAG   212 Target Full Sequence	1.5	TSA: Arachis hypogaea Unigene33256 mRNA sequence	NA	coding protein	psRNATarget
JR561934.1	ncRNA:21   CCGUAUUAAAAGGUUAGGUUC   1   **||||*||*||||||||||| targets:508   UCCAUACUUCUCCAAUCCAAG   528 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene21961 mRNA sequence	NA	coding protein	psRNATarget
GAER01036883.1	ncRNA:21   CCGUAUUAAAAGGUUAGGUUC   1   **||*|||||||*|||||||| targets:492   CUCACAAUUUUCAAAUCCAAG   512 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene36907 mRNA sequence	NA	coding protein	psRNATarget
GAER01020308.1	ncRNA:21   CCGUAUUAAAAGGUUAGGUUC   1   **||||*||*||||||||||| targets:648   UCCAUACUUCUCCAAUCCAAG   668 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene20318 mRNA sequence	NA	coding protein	psRNATarget