Search result

BaseInfo

ncRNA ID	novel_ahy_miR1102
Species	Arachis hypogaea
Class	miRNA
Genome position	Araip.B06:124913057-124913146 [-]
Reference genome	Araip_v1.0
Source	SRR2922381
Length	24
Mature sequence(if miRNA)	1 - UUCUCAAUUAUCAACUUCACGUGA - 24
Stem-loop(if miRNA)	--              C  A               --U    U GA   ACGUGAAGUUGAUA UU AGAGCUGUUAGAUAA   UUUA U  U   |||||||||||||| || |||||||||||||||   |||| |   UGCACUUCAACUAU AA UCUUGACAAUCUAUU   AAAU A  U AG              U  C               UUU    C AU
Stem-loop sequence	ACGUGAAGUUGAUACUUAAGAGCUGUUAGAUAAUUUUAUUGAUUUAACUAAAUUUUUAUCUAACAGUUCUCAAUUAUCAACUUCACGUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GAER01019374.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |||||||||||||||||||||||= targets:1384   UCACGUGAAGUUGAUAAUUGAGAG   1407 Target Full Sequence	1.0	TSA: Arachis hypogaea Unigene19383 mRNA sequence	NA	coding protein	psRNATarget
EZ726844.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|=|||||||||||||||||*|| targets:142   UUAUGUGAAGUUGAUAAUUGAAAA   165 Target Full Sequence	1.5	TSA: Arachis hypogaea CL1Contig5860.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ722147.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   ||||||||||||||||=||||||= targets:217   UCACGUGAAGUUGAUAGUUGAGAG   240 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig1163.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01010760.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   *|||||||||||||||=||||||= targets:149   ACACGUGAAGUUGAUAGUUGAGAG   172 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene10768 mRNA sequence	NA	coding protein	psRNATarget
JR551010.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |||||||||||||||||*|||||= targets:23   UCACGUGAAGUUGAUAACUGAGAG   46 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene10638 mRNA sequence	NA	coding protein	psRNATarget
GAER01004465.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   ||||||||||||||||*||||||= targets:65   UCACGUGAAGUUGAUACUUGAGAG   88 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene4467 mRNA sequence	NA	coding protein	psRNATarget
JR552323.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   ||||||||||||||||*||||||= targets:134   UCACGUGAAGUUGAUACUUGAGAG   157 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene11992 mRNA sequence	NA	coding protein	psRNATarget
EZ730526.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:182   UUACGUGAAGUUGAUAACUGAGAG   205 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig9542.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01052086.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   ||||*|||||||||||=||||||= targets:243   UCACCUGAAGUUGAUAGUUGAGAG   266 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene52124 mRNA sequence	NA	coding protein	psRNATarget
GAER01040999.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:71   UUACGUGAAGUUGAUAACUGAGAG   94 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene41030 mRNA sequence	NA	coding protein	psRNATarget
JR556801.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:171   UUACGUGAAGUUGAUAACUGAGAG   194 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene16625 mRNA sequence	NA	coding protein	psRNATarget
EZ740856.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |||=||*|||||||||=||||||| targets:272   UCAUGUAAAGUUGAUAGUUGAGAA   295 Target Full Sequence	2.5	TSA: Arachis hypogaea CL3091Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01025961.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:635   UUACGUGAAGUUGAUAACUGAGAG   658 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25978 mRNA sequence	NA	coding protein	psRNATarget
EZ727045.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:1084   UUACGUGAAGUUGAUAACUGAGAG   1107 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig6061.Arhy mRNA sequence	NA	coding protein	psRNATarget
GAER01025960.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:1178   UUACGUGAAGUUGAUAACUGAGAG   1201 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25977 mRNA sequence	NA	coding protein	psRNATarget
GAER01025962.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|||||||||||||||*|||||= targets:1259   UUACGUGAAGUUGAUAACUGAGAG   1282 Target Full Sequence	2.5	TSA: Arachis hypogaea Unigene25979 mRNA sequence	NA	coding protein	psRNATarget
EZ755942.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|=|||||||||||||*|||||= targets:609   UUAUGUGAAGUUGAUAACUGAGAG   632 Target Full Sequence	2.5	TSA: Arachis hypogaea CL2358Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget
JR581646.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   ||||*||||||||||||*|||||= targets:55   UCACAUGAAGUUGAUAACUGAGAG   78 Target Full Sequence	2.5	TSA: Arachis hypogaea Ahy.Unigene47526 mRNA sequence	NA	coding protein	psRNATarget
EZ723307.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=||*||||||||||||*|||||* targets:135   UUACAUGAAGUUGAUAACUGAGAU   158 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig2323.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ733973.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |=|=*|*|||||||||=||||||| targets:105   UUAUAUAAAGUUGAUAGUUGAGAA   128 Target Full Sequence	2.5	TSA: Arachis hypogaea CL1Contig12989.Arhy mRNA sequence	NA	coding protein	psRNATarget
EZ747098.1	ncRNA:24   AGUGCACUUCAACUAUUAACUCUU   1   |||=||*||*|||||||||||||= targets:56   UCAUGUAAAAUUGAUAAUUGAGAG   79 Target Full Sequence	3.0	TSA: Arachis hypogaea CL17494Contig1.Arhy mRNA sequence	NA	coding protein	psRNATarget