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BaseInfo

ncRNA ID novel_ahy_miR1096
Species Arachis hypogaea
Class miRNA
Genome position Araip.B06:14243728-14243892 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 145 - UGCCUUUGGAACUUGUACUUG - 165
Stem-loop(if miRNA) --        C       C         A      A  UU              CUA            CAA    AAU   A
  AGUACAAG UCCAAAG CACAAAAUC ACCGUG AU  AUCAAUAUAUUUAU   UCAUUUUUCUUA   UUUA   GAA U
  |||||||| ||||||| ||||||||| |||||| ||  ||||||||||||||   ||||||||||||   ||||   ||| A
  UCAUGUUC AGGUUUC GUGUUUUAG UGGCAU UA  UAGUUAUGUAAAUA   AGUAAGAGGAAU   AAAU   CUU U
GU        A       C         G      C  CU              AAG            -CA    -AU   U
Stem-loop sequence AGUACAAGCUCCAAAGCCACAAAAUCAACCGUGAAUUUAUCAAUAUAUUUAUCUAUCAUUUUUCUUACAAUUUAAAUGAAAUAUUUUCUAUAAAACUAAGGAGAAUGAGAAAUAAAUGUAUUGAUUCAUCUACGGUGGAUUUUGUGCCUUUGGAACUUGUACUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01037977.1
ncRNA:21   GUUCAUGUUCAAGGUUUCCGU   1
  *||||==||||||||||||||
targets:65   GAAGUGUAAGUUCCAAAGGCA   85

2.0 TSA: Arachis hypogaea Unigene38003 mRNA sequence NA coding protein psRNATarget