ncRNA ID | novel_ahy_miR1096 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B06:14243728-14243892 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922381 |
Length | 21 |
Mature sequence(if miRNA) | 145 - UGCCUUUGGAACUUGUACUUG - 165 |
Stem-loop(if miRNA) |
--        C       C         A      A  UU              CUA            CAA    AAU   A   AGUACAAG UCCAAAG CACAAAAUC ACCGUG AU  AUCAAUAUAUUUAU   UCAUUUUUCUUA   UUUA   GAA U   |||||||| ||||||| ||||||||| |||||| ||  ||||||||||||||   ||||||||||||   ||||   ||| A   UCAUGUUC AGGUUUC GUGUUUUAG UGGCAU UA  UAGUUAUGUAAAUA   AGUAAGAGGAAU   AAAU   CUU U GU        A       C         G      C  CU              AAG            -CA    -AU   U |
Stem-loop sequence | AGUACAAGCUCCAAAGCCACAAAAUCAACCGUGAAUUUAUCAAUAUAUUUAUCUAUCAUUUUUCUUACAAUUUAAAUGAAAUAUUUUCUAUAAAACUAAGGAGAAUGAGAAAUAAAUGUAUUGAUUCAUCUACGGUGGAUUUUGUGCCUUUGGAACUUGUACUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01037977.1 |
|
2.0 | TSA: Arachis hypogaea Unigene38003 mRNA sequence | NA | coding protein | psRNATarget |