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BaseInfo

ncRNA ID novel_ahy_miR1088
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:149668331-149668510 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 157 - UGACAAAUGUACCUAUAUAAGAAU - 180
Stem-loop(if miRNA) --           - -                CG C    A  AC            C  CC                 GGAC     UUA  U
  UGACAAAUGUA C CUAUAUAAGAAUAAAA  A AAUU UA  UACGGAAGAUAG UU  GUGUGCCAAGAGUACUC    GUUGG   CA A
  ||||||||||| | ||||||||||||||||  | |||| ||  |||||||||||| ||  |||||||||||||||||    |||||   ||
  ACUGUUUACAU G GAUAUAUUCUUAUUUU  U UUAA AU  GUGCCUUCUAUC AA  UACACGGUUCUUAUGGG    UAGCC   GU A
CG           A A                AU A    C  --            A  AA                 ---A     -UA  U
Stem-loop sequence UGACAAAUGUACCUAUAUAAGAAUAAAACGACAAUUAUAACUACGGAAGAUAGCUUCCGUGUGCCAAGAGUACUCGGACGUUGGUUACAUAAUUGAUCCGAUAGGGUAUUCUUGGCACAUAAAAACUAUCUUCCGUGUACAAUUAUUAUUUUAUUCUUAUAUAGAGAUACAUUUGUCAGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01007745.1
ncRNA:24   UAAGAAUAUAUCCAUGUAAACAGU   1
  ||||||||||=|||||||||||||
targets:10   AUUCUUAUAUGGGUACAUUUGUCA   33

1.0 TSA: Arachis hypogaea Unigene7752 mRNA sequence NA coding protein psRNATarget
GAER01036063.1
ncRNA:24   UAAGAAUAUAUCCAUGUAAACAGU   1
  ||||||||||||||||||||||**
targets:1234   AUUCUUAUAUAGGUACAUUUGUAU   1257

2.5 TSA: Arachis hypogaea Unigene36086 mRNA sequence NA coding protein psRNATarget
EZ741935.1
ncRNA:24   UAAGAAUAUAUCCAUGUAAACAGU   1
  ||||||||||=*||||||||||||
targets:828   AUUCUUAUAUGAGUACAUUUGUCA   851

2.5 TSA: Arachis hypogaea CL8337Contig1.Arhy mRNA sequence NA coding protein psRNATarget