ncRNA ID |
novel_ahy_miR1088 |
Species |
Arachis hypogaea |
Class |
miRNA |
Genome position |
Araip.B05:149668331-149668510 [-] |
Reference genome |
Araip_v1.0 |
Source |
SRR2922381
|
Length |
24 |
Mature sequence(if miRNA) |
157 - UGACAAAUGUACCUAUAUAAGAAU - 180 |
Stem-loop(if miRNA) |
--           - -                CG C    A  AC            C  CC                 GGAC     UUA  U
  UGACAAAUGUA C CUAUAUAAGAAUAAAA  A AAUU UA  UACGGAAGAUAG UU  GUGUGCCAAGAGUACUC    GUUGG   CA A
  ||||||||||| | ||||||||||||||||  | |||| ||  |||||||||||| ||  |||||||||||||||||    |||||   ||
  ACUGUUUACAU G GAUAUAUUCUUAUUUU  U UUAA AU  GUGCCUUCUAUC AA  UACACGGUUCUUAUGGG    UAGCC   GU A
CG           A A                AU A    C  --            A  AA                 ---A     -UA  U
|
Stem-loop sequence |
UGACAAAUGUACCUAUAUAAGAAUAAAACGACAAUUAUAACUACGGAAGAUAGCUUCCGUGUGCCAAGAGUACUCGGACGUUGGUUACAUAAUUGAUCCGAUAGGGUAUUCUUGGCACAUAAAAACUAUCUUCCGUGUACAAUUAUUAUUUUAUUCUUAUAUAGAGAUACAUUUGUCAGC
|