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BaseInfo

ncRNA ID	ath-miRf10425-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - GAGAAGACUCUGAAGCUGGCA - NA
Stem-loop(if miRNA)	U  G    G  A      --           --C   U -    UGCU      UG UCGA UG UUAGCU  GGAGUCUUCUU   UCU C CUUA    CGAGU  || |||| || ||||||  |||||||||||   ||| | ||||    ||||G  AU AGCU AC GGUCGA  UCUCAGAAGAG   AGA G GAGU    GUUCU G  G    G  -      AG           UUU   C U    ---U
Stem-loop sequence	UUGGUCGAGUGAUUAGCUGGAGUCUUCUUCUCUUCCUUAUGCUCGAGUGUCUUGUUGAGUGCAGAUUUGAGAAGACUCUGAAGCUGGCAGUCGAGUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   *|||||||||||||||||||| targets:396   CGCCAGCUUCAGAGUCUUCUC   416 Target Full Sequence	0.0	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   |||||||*||||||||||||| targets:741   UGCCAGCYUCAGAGUCUUCUC   761 Target Full Sequence	1.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   |||=||||||||||||||||| targets:761   UGCUAGCUUCAGAGUCUUCUC   781 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   |||=||||||||||||||||| targets:1088   UGCUAGCUUCAGAGUCUUCUC   1108 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   |||=||||||||||||||||| targets:1136   UGCUAGCUUCAGAGUCUUCUC   1156 Target Full Sequence	1.0	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
AY084487.1	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   **=|||||||*|||||||||| targets:11   CUUCAGCUUCUGAGUCUUCUC   31 Target Full Sequence	2.5	Arabidopsis thaliana clone 109398 mRNA, complete sequence	NA	coding protein	psRNATarget
BX824225.1	ncRNA:20   CGGUCGAAGUCUCAGAAGAG   1   *=|||||||*|||||||||| targets:1   UUCAGCUUCUGAGUCUUCUC   20 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZH04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_111963.3	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   **=|||||||*|||||||||| targets:196   CUUCAGCUUCUGAGUCUUCUC   216 Target Full Sequence	2.5	Arabidopsis thaliana Duplicated homeodomain-like superfamily protein mRNA	Duplicated homeodomain-like superfamily protein(AT3G11280)	coding protein	psRNATarget
NM_180227.4	ncRNA:21   ACGGUCGAAGUCUCAGAAGAG   1   **=|||||||*|||||||||| targets:160   CUUCAGCUUCUGAGUCUUCUC   180 Target Full Sequence	2.5	Arabidopsis thaliana Duplicated homeodomain-like superfamily protein mRNA	Duplicated homeodomain-like superfamily protein(AT3G11280)	coding protein	psRNATarget