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BaseInfo

ncRNA ID novel_ahy_miR1085
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:142428399-142428494 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 23
Mature sequence(if miRNA) 74 - CAAGUUAUGGCUGUUUUUGACUG - 96
Stem-loop(if miRNA) --AAA           G      UC        ----         AUUA
     AAAAACAGCCA AACUUG  UUAUUUAG    CAUUAAUUG    U
     ||||||||||| ||||||  ||||||||    |||||||||
     UUUUUGUCGGU UUGAAC  AAUAAAUC    GUAAUUAAC    C
GUCAG           A      GA        AUAA         AACG
Stem-loop sequence AAAAAAAACAGCCAGAACUUGUCUUAUUUAGCAUUAAUUGAUUAUCGCAACAAUUAAUGAAUACUAAAUAAAGCAAGUUAUGGCUGUUUUUGACUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01046787.1
ncRNA:23   GUCAGUUUUUGUCGGUAUUGAAC   1
  =||*||||||=||||||||||||
targets:94   UAGCCAAAAAUAGCCAUAACUUG   116

1.5 TSA: Arachis hypogaea Unigene46822 mRNA sequence NA coding protein psRNATarget
JR579181.1
ncRNA:23   GUCAGUUUUUGUCGGUAUUGAAC   1
  ==|*||||||=|||||||||||*
targets:167   UGGCCAAAAAUAGCCAUAACUUU   189

2.5 TSA: Arachis hypogaea Ahy.Unigene44308 mRNA sequence NA coding protein psRNATarget