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BaseInfo

ncRNA ID novel_ahy_miR1084
Species Arachis hypogaea
Class miRNA
Genome position Araip.B05:142404836-142404957 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 1 - CCAACGGAAAAGGCUGACGUG - 21
Stem-loop(if miRNA) --                                        -GA    A G    CCC   U
  CCAACGGAAAAGGCUGACGUGGCUCCCCUUCUGCUUACCU   CAUC C GCUG   ACG G
  ||||||||||||||||||||||||||||||||||||||||   |||| | ||||   ||| G
  GGUUGCCUUUUCUGACUGCACCGAGGGGGAGACGAAUGGG   GUAG G UGAU   UGC C
CG                                        GAG    - G    ---   A
Stem-loop sequence CCAACGGAAAAGGCUGACGUGGCUCCCCUUCUGCUUACCUGACAUCACGGCUGCCCACGUGGCACGUUAGUGGGAUGGAGGGGUAAGCAGAGGGGGAGCCACGUCAGUCUUUUCCGUUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR549774.1
ncRNA:21   GUGCAGUCGGAAAAGGCAACC   1
  ||||||||*|||||||||||*
targets:412   CACGUCAGACUUUUCCGUUGU   432

2.5 TSA: Arachis hypogaea Ahy.Unigene9378 mRNA sequence NA coding protein psRNATarget