Search result

BaseInfo

ncRNA ID novel_ahy_miR1080
Species Arachis hypogaea
Class miRNA
Genome position Araip.B01:4922048-4922179 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 1 - UUGUCCUAUUUAAGUCCCUAACAU - 24
Stem-loop(if miRNA) --     C         C      A         C U      U     CC     --CAAU  CGU
  UUGUC UAUUUAAGU CCUAAC UUUCAAAAU G CUCAAU UUAUC  GCCGU      UC   U
  ||||| ||||||||| |||||| ||||||||| | |||||| |||||  |||||      ||
  AGCAG AUAAAUUCA GGAUUG AAAGUUUUA C GAGUUA AAUAG  CGGUA      AG   A
UU     A         A      C         A U      C     AA     AUCCUU  AUA
Stem-loop sequence UUGUCCUAUUUAAGUCCCUAACAUUUCAAAAUCGUCUCAAUUUUAUCCCGCCGUCAAUUCCGUUAAUAGAUUCCUAAUGGCAAGAUAACAUUGAGUCAAUUUUGAAACGUUAGGAACUUAAAUAAGACGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01050818.1
ncRNA:24   UACAAUCCCUGAAUUUAUCCUGUU   1
  |*|||||||||||||||||*||||
targets:317   ACGUUAGGGACUUAAAUAGAACAA   340

1.5 TSA: Arachis hypogaea Unigene50856 mRNA sequence NA coding protein psRNATarget