ncRNA ID | novel_ahy_miR1080 |
Species | Arachis hypogaea |
Class | miRNA |
Genome position | Araip.B01:4922048-4922179 [+] |
Reference genome | Araip_v1.0 |
Source | SRR2922381 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGUCCUAUUUAAGUCCCUAACAU - 24 |
Stem-loop(if miRNA) |
--     C         C      A         C U      U     CC     --CAAU  CGU   UUGUC UAUUUAAGU CCUAAC UUUCAAAAU G CUCAAU UUAUC  GCCGU      UC   U   ||||| ||||||||| |||||| ||||||||| | |||||| |||||  |||||      ||   AGCAG AUAAAUUCA GGAUUG AAAGUUUUA C GAGUUA AAUAG  CGGUA      AG   A UU     A         A      C         A U      C     AA     AUCCUU  AUA |
Stem-loop sequence | UUGUCCUAUUUAAGUCCCUAACAUUUCAAAAUCGUCUCAAUUUUAUCCCGCCGUCAAUUCCGUUAAUAGAUUCCUAAUGGCAAGAUAACAUUGAGUCAAUUUUGAAACGUUAGGAACUUAAAUAAGACGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GAER01050818.1 |
|
1.5 | TSA: Arachis hypogaea Unigene50856 mRNA sequence | NA | coding protein | psRNATarget |