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BaseInfo

ncRNA ID ath-miRf10424-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UACUCGAGCUCGUGGUCGAGU - NA
Stem-loop(if miRNA)    UG GGG           UAA       G  ----   GCAGCUACUCGACCUGGGGGUCGACGGGUGUG
GAU  U   ACUCGACCAUG   UCGAGUG UG    GAG                                U
|||  |   |||||||||||   ||||||| ||    |||                                U
UUA  A   UGAGCUGGUGC   AGCUCAU GC    GGA                                G
   GU AUA           UCG       G  AGUA   CCUCAAGGACUACAUGAGCAGGUGUAGGAGAU
Stem-loop sequence GAUUGUGGGACUCGACCAUGUAAUCGAGUGGUGGAGGCAGCUACUCGACCUGGGGGUCGACGGGUGUGUUGUAGAGGAUGUGGACGAGUACAUCAGGAACUCCAGGAUGACGGUACUCGAGCUCGUGGUCGAGUAUAAUGAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:21   UGAGCUGGUGCUCGAGCUCAU   1
  |||||||||||||*|||||||
targets:1528   ACUCGACCACGAGGUCGAGUA   1548

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:21   UGAGCUGGUGCUCGAGCUCAU   1
  |||||||||||||*||||||=
targets:1152   ACUCGACCACGAGGUCGAGUG   1172

2.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget