ncRNA ID | ath-miRf10424-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UACUCGAGCUCGUGGUCGAGU - NA |
Stem-loop(if miRNA) |
   UG GGG           UAA       G  ----   GCAGCUACUCGACCUGGGGGUCGACGGGUGUG GAU  U   ACUCGACCAUG   UCGAGUG UG    GAG                                U |||  |   |||||||||||   ||||||| ||    |||                                U UUA  A   UGAGCUGGUGC   AGCUCAU GC    GGA                                G    GU AUA           UCG       G  AGUA   CCUCAAGGACUACAUGAGCAGGUGUAGGAGAU |
Stem-loop sequence | GAUUGUGGGACUCGACCAUGUAAUCGAGUGGUGGAGGCAGCUACUCGACCUGGGGGUCGACGGGUGUGUUGUAGAGGAUGUGGACGAGUACAUCAGGAACUCCAGGAUGACGGUACUCGAGCUCGUGGUCGAGUAUAAUGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183042.1 |
|
1.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
2.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |