Search result

BaseInfo

ncRNA ID novel_ahy_miR1068
Species Arachis hypogaea
Class miRNA
Genome position Araip.B04:76215549-76215764 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 23
Mature sequence(if miRNA) 194 - CAUGAAAGAUGAAAAUGCUGACA - 216
Stem-loop(if miRNA) --                              C  C    A                        C     AC  U        C            ---  UUUGGAA
  CAUGAAAGAUGAAAAUGCUGACAUAUGUAC CA ACUA AUCGAAACUAAACUUGUACCCACG AAGAU  UU UUGUGUGA AAAAGUACCCUG   UC       G
  |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||| |||||  || |||||||| ||||||||||||   ||       G
  GUAUUUUCUACUUUUGUGACUGUAUACAUG GU UGAU UAGCUUUGAUUUGAACAUGGGUGC UUCUA  GA GGCACACU UUUUCAUGGGAU   CC       U
AG                              A  A    C                        A     CA  C        A            GCA  GUGAGGU
Stem-loop sequence CAUGAAAGAUGAAAAUGCUGACAUAUGUACCCACACUAAAUCGAAACUAAACUUGUACCCACGCAAGAUACUUUUUGUGUGACAAAAGUACCCUGUCUUUGGAAGGUUGGAGUGCCACGUAGGGUACUUUUAUCACACGGCAGACAUCUUACGUGGGUACAAGUUUAGUUUCGAUCUAGUAUGAGUACAUAUGUCAGUGUUUUCAUCUUUUAUGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ740216.1
ncRNA:23   ACAGUCGUAAAAGUAGAAAGUAC   1
  **|||*||*||||||||||||||
targets:6   ACUCAACAGUUUCAUCUUUCAUG   28

2.0 TSA: Arachis hypogaea CL843Contig2.Arhy mRNA sequence NA coding protein psRNATarget
GAER01013839.1
ncRNA:23   ACAGUCGUAAAAGUAGAAAGUAC   1
  |||||||=||*||||||||||||
targets:41   UGUCAGCGUUAUCAUCUUUCAUG   63

2.5 TSA: Arachis hypogaea Unigene13847 mRNA sequence NA coding protein psRNATarget
GAER01008997.1
ncRNA:23   ACAGUCGUAAAAGUAGAAAGUAC   1
  **|=|||=||||||*||||||||
targets:104   GUUUAGCGUUUUCAACUUUCAUG   126

2.5 TSA: Arachis hypogaea Unigene9004 mRNA sequence NA coding protein psRNATarget
GAER01045084.1
ncRNA:23   ACAGUCGUAAAAGUAGAAAGUAC   1
  |*|||*|||||*|||||||||||
targets:275   UAUCACCAUUUCCAUCUUUCAUG   297

2.5 TSA: Arachis hypogaea Unigene45118 mRNA sequence NA coding protein psRNATarget
EZ748419.1
ncRNA:23   ACAGUCGUAAAAGUAGAAAGUAC   1
  |*|||*|||||*|||||||||||
targets:309   UAUCACCAUUUCCAUCUUUCAUG   331

2.5 TSA: Arachis hypogaea CL2634Contig1.Arhy mRNA sequence NA coding protein psRNATarget