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BaseInfo

ncRNA ID novel_ahy_miR1058
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:106235462-106235618 [-]
Reference genome Araip_v1.0
Source SRR2922381
Length 24
Mature sequence(if miRNA) 134 - AUGGAAGUGUAUUCGUAGAUGUGU - 157
Stem-loop(if miRNA) --          A     A              -A     C    UU   GC     --UUA     AGUGUCUUUAUAG
  AUGGAAGUGU UUCGU GAUGUGUUUAAUAA  AAUGU UUUU  AUA  UGUGU     AUAAA             A
  |||||||||| ||||| ||||||||||||||  ||||| ||||  |||  |||||     |||||
  UACCUUCAUA AAGCA CUACACAGAUUAUU  UUAUA AAAA  UAU  AUAUA     CUGUG             U
AA          C     C              AA     U    UU   GU     UUUCU     UAGGUCCUUUAUA
Stem-loop sequence AUGGAAGUGUAUUCGUAGAUGUGUUUAAUAAAAAUGUCUUUUUUAUAGCUGUGUUUAAUAAAAGUGUCUUUAUAGAUAUAUUUCCUGGAUGUGUCUCUUUAUAUAUGUAUUUAAAAUAUAUUAAUUAUUAGACACAUCCACGAACAUACUUCCAUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ736185.1
ncRNA:24   UGUGUAGAUGCUUAUGUGAAGGUA   1
  |||||||||||||*||||||||||
targets:144   ACACAUCUACGAAGACACUUCCAU   167

1.5 TSA: Arachis hypogaea CL163Contig1.Arhy mRNA sequence NA coding protein psRNATarget
JR546305.1
ncRNA:24   UGUGUAGAUGCUUAUGUGAAGGUA   1
  |||||||*|||||*||||||||||
targets:8   ACACAUCCACGAACACACUUCCAU   31

2.5 TSA: Arachis hypogaea Ahy.Unigene5750 mRNA sequence NA coding protein psRNATarget
GAER01035600.1
ncRNA:24   UGUGUAGAUGCUUAUGUGAAGGUA   1
  |||||||*|||||*||||||||||
targets:489   ACACAUCCACGAACACACUUCCAU   512

2.5 TSA: Arachis hypogaea Unigene35623 mRNA sequence NA coding protein psRNATarget