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BaseInfo

ncRNA ID novel_ahy_miR1054
Species Arachis hypogaea
Class miRNA
Genome position Araip.B03:128396171-128396251 [+]
Reference genome Araip_v1.0
Source SRR2922381
Length 21
Mature sequence(if miRNA) 61 - GCUCUCUAUUCUUCUGUCAUC - 81
Stem-loop(if miRNA) --          -             C  -   U     UC
  UGACAGAAGA UAGAGAGCACAGA GA UGA AUGCA  A
  |||||||||| ||||||||||||| || ||| |||||  A
  ACUGUCUUCU AUCUCUCGUGUUU CU ACU UACGU  U
CU          U             U  C   C     CU
Stem-loop sequence UGACAGAAGAUAGAGAGCACAGACGAUGAUAUGCAUCAAUUCUGCAUCUCACUCUUUUGUGCUCUCUAUUCUUCUGUCAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01053340.1
ncRNA:21   CUACUGUCUUCUUAUCUCUCG   1
  ||||||||||||=||||||||
targets:106   GAUGACAGAAGAGUAGAGAGC   126

1.5 TSA: Arachis hypogaea Unigene53379 mRNA sequence NA coding protein psRNATarget
GAER01057332.1
ncRNA:21   CUACUGUCUUCUUAUCUCUCG   1
  ||*||=||||||||||||||=
targets:24   GACGAUAGAAGAAUAGAGAGU   44

3.0 TSA: Arachis hypogaea Unigene57377 mRNA sequence NA coding protein psRNATarget
EZ732653.1
ncRNA:21   CUACUGU-CUUCUUAUCUCUCG   1
  **|||=|-||||||||||||||
targets:437   CUUGAUAAGAAGAAUAGAGAGC   458

3.0 TSA: Arachis hypogaea CL1Contig11669.Arhy mRNA sequence NA coding protein psRNATarget