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BaseInfo

ncRNA ID novel_ahy_miR1052
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:3695147-3695279 [+]
Reference genome Araip_v1.0
Source SRR1323745
Length 24
Mature sequence(if miRNA) 1 - AAAUUCAGAUGCAGUCGACUUCAC - 24
Stem-loop(if miRNA) --        A                G            U                AAAUUUAGUC
  AAAUUCAG UGCAGUCGACUUCACG GAAGUUGAUACU AAGAGUCGUUAGAUGA          A
  |||||||| |||||||||||||||| |||||||||||| ||||||||||||||||
  UUUGAGUC ACGUCAGCUGAAGUGC CUUCAACUAUGA UUUUUAGCAAUUUACU          A
CC        C                A            -                AAACUGACUA
Stem-loop sequence AAAUUCAGAUGCAGUCGACUUCACGGGAAGUUGAUACUUAAGAGUCGUUAGAUGAAAAUUUAGUCAAAUCAGUCAAAUCAUUUAACGAUUUUUAGUAUCAACUUCACGUGAAGUCGACUGCACCUGAGUUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01054132.1
ncRNA:24   CACUUCAGCUGACGUAGACUUAAA   1
  |||||||||||||||*||||||||
targets:197   GUGAAGUCGACUGCACCUGAAUUU   220

1.5 TSA: Arachis hypogaea Unigene54173 mRNA sequence NA coding protein psRNATarget
GAER01039538.1
ncRNA:24   CACUUCAGCUGACGUAGACUUAAA   1
  ||*|*||||||||||*||||||||
targets:480   GUAAUGUCGACUGCACCUGAAUUU   503

1.5 TSA: Arachis hypogaea Unigene39565 mRNA sequence NA coding protein psRNATarget