Search result

BaseInfo

ncRNA ID novel_ahy_miR1051
Species Arachis hypogaea
Class miRNA
Genome position Araip.B02:83499896-83500020 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 22
Mature sequence(if miRNA) 104 - CUUGGUCUUUUGAGAGCUUUUU - 125
Stem-loop(if miRNA) ---AAAAC  UG         AAU   -AG    G  UG   A   UAUUCUU    U    U    C
        UU  AAGGAUCAA   GGG   UGUG UU  UGA AUU       GAAC CCAU GAAC A
        ||  |||||||||   |||   |||| ||  ||| |||       |||| |||| ||||
        GA  UUUCUGGUU   CCC   GCAC AA  ACU UGG       CUUG GGUG CUUG A
UUUUUCGA  GU         ---   AAA    G  GU   C   ----UCU    -    -    G
Stem-loop sequence AAAACUUUGAAGGAUCAAAAUGGGAGUGUGGUUUGUGAAAUUUAUUCUUGAACUCCAUUGAACCAAGGUUCGUGGGUUCUCUGGUCUCAUGAAGCACGAAACCCUUGGUCUUUUGAGAGCUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ726307.1
ncRNA:22   UUUUUCGAGAGUUUUCUGGUUC   1
  *==||*|||||||||||=||||
targets:843   CGGAACCUCUCAAAAGAUCAAG   864

2.5 TSA: Arachis hypogaea CL1Contig5323.Arhy mRNA sequence NA coding protein psRNATarget
GAER01022061.1
ncRNA:22   UUUUUCGAGAGUUUUCUGGUUC   1
  *==||*|||||||||||=||||
targets:860   CGGAACCUCUCAAAAGAUCAAG   881

2.5 TSA: Arachis hypogaea Unigene22072 mRNA sequence NA coding protein psRNATarget