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BaseInfo

ncRNA ID novel_ahy_miR1047
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:29122931-29122983 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 30 - UGUAUCUCGUUUACACUGUAAACA - 53
Stem-loop(if miRNA) --      C            GA    
  UUUACA UGUAAACGAGAU  ACAUU
  |||||| ||||||||||||  ||||C
  AAAUGU ACAUUUGCUCUA  UGUAU
AC      C            --    
Stem-loop sequence UUUACACUGUAAACGAGAUGAACAUUCUAUGUAUCUCGUUUACACUGUAAACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR578749.1
ncRNA:24   ACAAAUGUCACAUUUGCUCUAUGU   1
  **||||||||||||||||||||*=
targets:54   CAUUUACAGUGUAAACGAGAUAAG   77

2.5 TSA: Arachis hypogaea Ahy.Unigene43542 mRNA sequence NA coding protein psRNATarget