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BaseInfo

ncRNA ID ath-miRf10421-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CACUCGGCCUCGUGGUCGAGU - NA
Stem-loop(if miRNA)    G AGA         U            AUG G   -GA UG  GG
GGU A   CACUCGACC CGGGGUCGAGUG   U AUC   G  AU  U
||| |   ||||||||| ||||||||||||   | |||   |  ||
CUA U   GUGAGCUGG GCUCCGGCUCAC   A UGG   U  UG  C
   G GUA         U            AGA G   AGG GU  GA
Stem-loop sequence GGUGAAGACACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUUGUGGAGGUGAAGACACUCGGCCUCGUGGUCGAGUGAUGUGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_103391.1
ncRNA:21   UGAGCUGGUGCUCCGGCUCAC   1
  ||||||||||||||=||||||
targets:1152   ACUCGACCACGAGGUCGAGUG   1172

1.5 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget
EF183042.1
ncRNA:21   UGAGCUGGUGCUCCGGCUCAC   1
  ||||||||*||||||||||||
targets:1677   ACUCGACCUCGAGGCCGAGUG   1697

1.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183042.1
ncRNA:21   UGAGCUGGUGCUCCGGCUCAC   1
  ||||||||||||||=|||||*
targets:1528   ACUCGACCACGAGGUCGAGUA   1548

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget