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BaseInfo

ncRNA ID novel_ahy_miR1038
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:67082078-67082150 [-]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 50 - GGCUUAUGGACUGGUAGAGGACGU - 73
Stem-loop(if miRNA) --  C       -C      A   CGUGCUA        U
  GG UUAUGGA  UGGUAG GGA       GUAAAGGU A
  || |||||||  |||||| |||       |||||||| A
  CC AAUACUU  GCCGUC CCU       CAUUUCCG A
AU  U       UA      -   ------A        G
Stem-loop sequence GGCUUAUGGACUGGUAGAGGACGUGCUAGUAAAGGUUAAAGGCCUUUACAUCCCUGCCGAUUUCAUAAUCCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01002194.1
ncRNA:24   UGCAGGAGAUGGUCAGGUAUUCGG   1
  |||||||||||||*|||||||||=
targets:12   ACGUCCUCUACCAAUCCAUAAGCU   35

2.5 TSA: Arachis hypogaea Unigene2195 mRNA sequence NA coding protein psRNATarget
GAER01023980.1
ncRNA:24   UGCAGGAGAUGGUCAGGUAUUCGG   1
  ***|||||||=|||||||*|||||
targets:2404   UGAUCCUCUAUCAGUCCACAAGCC   2427

2.5 TSA: Arachis hypogaea Unigene23991 mRNA sequence NA coding protein psRNATarget