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BaseInfo

ncRNA ID novel_ahy_miR1034
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:9909926-9910088 [+]
Reference genome Araip_v1.0
Source SRR2922380;SRR2922381
Length 22
Mature sequence(if miRNA) 142 - UCACCGUUAAUACAGAAUCCUU - 163
Stem-loop(if miRNA) --           -      U       G       CGU        -   UC    C       A         AAGUUUUU
  GGAUUCUGUAU AACGGU GACAUGA UUUAUCU   UUUUAAAG AUA  UUUG AUUUCAU UGAGAUUUA        A
  ||||||||||| |||||| ||||||| |||||||   |||||||| |||  |||| ||||||| |||||||||
  CCUAAGACAUA UUGCCA CUGUACU AAAUAGA   GAAAUUUU UAU  AAAU UAAAGUA ACUCUAAAU        U
UU           A      -       G       AUU        A   UU    U       C         AUAAUGGU
Stem-loop sequence GGAUUCUGUAUAACGGUUGACAUGAGUUUAUCUCGUUUUUAAAGAUAUCUUUGCAUUUCAUAUGAGAUUUAAAGUUUUUAUUGGUAAUAUAAAUCUCACAUGAAAUUUAAAUUUAUAUUUUAAAGUUAAGAUAAAGUCAUGUCACCGUUAAUACAGAAUCCUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JR551935.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  |||||||=||||||||||||||
targets:311   AAGGAUUUUGUAUUAACGGUGA   332

1.0 TSA: Arachis hypogaea Ahy.Unigene11590 mRNA sequence NA coding protein psRNATarget
GAER01020161.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:259   UUGUAUUCUGUAUAAACGGUGA   280

2.5 TSA: Arachis hypogaea Unigene20170 mRNA sequence NA coding protein psRNATarget
JR542096.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:396   UUGUAUUCUGUAUAAACGGUGA   417

2.5 TSA: Arachis hypogaea Ahy.Unigene1430 mRNA sequence NA coding protein psRNATarget
GAER01020160.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:509   UUGUAUUCUGUAUAAACGGUGA   530

2.5 TSA: Arachis hypogaea Unigene20169 mRNA sequence NA coding protein psRNATarget
JR553562.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:1171   UUGUAUUCUGUAUAAACGGUGA   1192

2.5 TSA: Arachis hypogaea Ahy.Unigene13300 mRNA sequence NA coding protein psRNATarget
GAER01020164.1
ncRNA:22   UUCCUAAGACAUAAUUGCCACU   1
  **|*|||||||||*||||||||
targets:3170   UUGUAUUCUGUAUAAACGGUGA   3191

2.5 TSA: Arachis hypogaea Unigene20173 mRNA sequence NA coding protein psRNATarget