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BaseInfo

ncRNA ID novel_ahy_miR1027
Species Arachis hypogaea
Class miRNA
Genome position Araip.B10:134063428-134063513 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 1 - UUGGAUCAUCUAAAUUUUGAAUUU - 24
Stem-loop(if miRNA) --       A           A     UU       AAGAUUA
  UUGGAUC UCUAAAUUUUG AUUUU  CUUUAGA       C
  ||||||| ||||||||||| |||||  |||||||       A
  AACCUAG AGAUUUAAAAC UAAAG  GAAAUCU       U
UA       G           C     -U       CCCAUUU
Stem-loop sequence UUGGAUCAUCUAAAUUUUGAAUUUUUUCUUUAGAAAGAUUACAUUUUACCCUCUAAAGUGAAAUCCAAAAUUUAGAGGAUCCAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ748104.1
ncRNA:24   UUUAAGUUUUAAAUCUACUAGGUU   1
  ||||||||||||||||*|||||||
targets:527   AAAUUCAAAAUUUAGAGGAUCCAA   550

1.5 TSA: Arachis hypogaea CL1522Contig1.Arhy mRNA sequence NA coding protein psRNATarget
GAER01015063.1
ncRNA:24   UUUAAGUUUUAAAUCUACUAGGUU   1
  ||||||||||||||||*|||||||
targets:112   AAAUUCAAAAUUUAGAGGAUCCAA   135

1.5 TSA: Arachis hypogaea Unigene15071 mRNA sequence NA coding protein psRNATarget
GAER01025695.1
ncRNA:24   UUUAAGUUUUAAAUCUACUAGGUU   1
  =||||*|=||*|||||||||||||
targets:1132   GAAUUGAGAAGUUAGAUGAUCCAA   1155

3.0 TSA: Arachis hypogaea Unigene25712 mRNA sequence NA coding protein psRNATarget
EZ751828.1
ncRNA:24   UUUAAGUUUUAAAUCUACUAGGUU   1
  =||||*|=||*|||||||||||||
targets:693   GAAUUGAGAAGUUAGAUGAUCCAA   716

3.0 TSA: Arachis hypogaea CL1177Contig1.Arhy mRNA sequence NA coding protein psRNATarget