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BaseInfo

ncRNA ID ath-miRf10419-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - AGGUGAAGACACUCGGCCUCG - NA
Stem-loop(if miRNA)          U            AUG G   -GA UG  GG
CACUCGACC CGGGGUCGAGUG   U AUC   G  AU  U
||||||||| ||||||||||||   | |||   |  ||
GUGAGCUGG GCUCCGGCUCAC   A UGG   U  UG  C
         U            AGA G   AGG GU  GA
Stem-loop sequence CACUCGACCUCGGGGUCGAGUGAUGUGAUCGAGUGAUGGUCAGGUUGUGGAGGUGAAGACACUCGGCCUCGUGGUCGAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EF183042.1
ncRNA:21   GCUCCGGCUCACAGAAGUGGA   1
  |||||||||||||||||||||
targets:1686   CGAGGCCGAGUGUCUUCACCU   1706

0.0 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:21   GCUCCGGCUCACAGAAGUGGA   1
  =||||=|||||||||||||||
targets:527   UGAGGUCGAGUGUCUUCACCU   547

1.0 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
NM_103391.1
ncRNA:21   GCUCCGGCUCACAGAAGUGGA   1
  ||*||=|||||||||||||||
targets:1220   CGUGGUCGAGUGUCUUCACCU   1240

2.0 Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA DNAse I-like superfamily protein(AT1G40390) coding protein psRNATarget