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BaseInfo

ncRNA ID novel_ahy_miR1023
Species Arachis hypogaea
Class miRNA
Genome position Araip.B09:42908274-42908408 [+]
Reference genome Araip_v1.0
Source SRR2922380
Length 24
Mature sequence(if miRNA) 112 - AGGUGAGCUUAGCAACCGAGACUA - 135
Stem-loop(if miRNA) --              UUA    -   U  --     UUG       CUUU     CUGAUU       AU
  GUUUUGGUUGCUGA   UUAU UCU GC  UUUAA   AUAGAAU    AUAUC      UAAAUAA  A
  ||||||||||||||   |||| ||| ||  |||||   |||||||    |||||      |||||||
  CAGAGCCAACGAUU   AGUG AGG CG  AGAUU   UAUCUUA    UAUAG      AUUUAUU  G
AU              -CG    G   C  UA     -CA       --UU     UAAAUC       AU
Stem-loop sequence GUUUUGGUUGCUGAUUAUUAUUCUUGCUUUAAUUGAUAGAAUCUUUAUAUCCUGAUUUAAAUAAAUAGUAUUAUUUACUAAAUGAUAUUUAUUCUAUACUUAGAAUGCCGGAGGUGAGCUUAGCAACCGAGACUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GAER01018985.1
ncRNA:24   AUCAGAGCCAACGAUUCGAGUGGA   1
  *|*|=|||*||||||=||||||||
targets:475   AAUUUUCGUUUGCUAGGCUCACCU   498

2.5 TSA: Arachis hypogaea Unigene18993 mRNA sequence NA coding protein psRNATarget
GAER01018989.1
ncRNA:24   AUCAGAGCCAACGAUUCGAGUGGA   1
  *|*|=|||*||||||=||||||||
targets:549   AAUUUUCGUUUGCUAGGCUCACCU   572

2.5 TSA: Arachis hypogaea Unigene18997 mRNA sequence NA coding protein psRNATarget